CD-HIT: accelerated for clustering the next-generation sequencing data L Fu, B Niu, Z Zhu, S Wu, W Li Bioinformatics 28 (23), 3150-3152, 2012 | 8994 | 2012 |
Comprehensive molecular characterization of gastric adenocarcinoma AJ Bass, V Thorsson, I Shmulevich, SM Reynolds, M Miller, B Bernard, ... Nature 513 (7517), 202, 2014 | 5610 | 2014 |
Mutational landscape and significance across 12 major cancer types C Kandoth, MD McLellan, F Vandin, K Ye, B Niu, C Lu, M Xie, Q Zhang, ... Nature 502 (7471), 333-339, 2013 | 5025 | 2013 |
The repertoire of mutational signatures in human cancer LB Alexandrov, J Kim, NJ Haradhvala, MN Huang, AWT Ng, Y Wu, A Boot, ... Nature 578 (7793), 94-101, 2020 | 2963 | 2020 |
CD-HIT Suite: a web server for clustering and comparing biological sequences Y Huang, B Niu, Y Gao, L Fu, W Li Bioinformatics 26 (5), 680-682, 2010 | 2672 | 2010 |
Pan-cancer analysis of whole genomes TITPCAWG Consortium Nature 578 (7793), 82-93, 2020 | 2545* | 2020 |
Multiplatform analysis of 12 cancer types reveals molecular classification within and across tissues of origin KA Hoadley, C Yau, DM Wolf, AD Cherniack, D Tamborero, S Ng, ... Cell 158 (4), 929-944, 2014 | 1608 | 2014 |
The evolutionary history of 2,658 cancers M Gerstung, C Jolly, I Leshchiner, SC Dentro, S Gonzalez, D Rosebrock, ... Nature 578 (7793), 122-128, 2020 | 1022 | 2020 |
Pan-cancer network analysis identifies combinations of rare somatic mutations across pathways and protein complexes MDM Leiserson, F Vandin, HT Wu, JR Dobson, JV Eldridge, JL Thomas, ... Nature genetics 47 (2), 106-114, 2015 | 996 | 2015 |
Patterns of somatic structural variation in human cancer genomes Y Li, ND Roberts, JA Wala, O Shapira, SE Schumacher, K Kumar, ... Nature 578 (7793), 112-121, 2020 | 831 | 2020 |
MSIsensor: microsatellite instability detection using paired tumor-normal sequence data B Niu, K Ye, Q Zhang, C Lu, M Xie, MD McLellan, MC Wendl, L Ding Bioinformatics 30 (7), 1015-1016, 2014 | 757 | 2014 |
WebMGA: a customizable web server for fast metagenomic sequence analysis S Wu, Z Zhu, L Fu, B Niu, W Li BMC genomics 12 (1), 1-9, 2011 | 663 | 2011 |
Comprehensive analysis of chromothripsis in 2,658 human cancers using whole-genome sequencing I Cortés-Ciriano, JJK Lee, R Xi, D Jain, YL Jung, L Yang, D Gordenin, ... Nature Genetics, 1-11, 2020 | 648 | 2020 |
Analyses of non-coding somatic drivers in 2,658 cancer whole genomes E Rheinbay, MM Nielsen, F Abascal, JA Wala, O Shapira, G Tiao, ... Nature 578 (7793), 102-111, 2020 | 585 | 2020 |
Ultrafast clustering algorithms for metagenomic sequence analysis W Li, L Fu, B Niu, S Wu, J Wooley Briefings in bioinformatics 13 (6), 656-668, 2012 | 515 | 2012 |
Pan-cancer analysis of whole genomes identifies driver rearrangements promoted by LINE-1 retrotransposition B Rodriguez-Martin, EG Alvarez, A Baez-Ortega, J Zamora, F Supek, ... Nature Genetics, 1-14, 2020 | 392 | 2020 |
The landscape of viral associations in human cancers M Zapatka, I Borozan, DS Brewer, M Iskar, A Grundhoff, M Alawi, N Desai, ... Nature genetics 52 (3), 320-330, 2020 | 382 | 2020 |
Comprehensive molecular characterization of mitochondrial genomes in human cancers Y Yuan, YS Ju, Y Kim, J Li, Y Wang, CJ Yoon, Y Yang, I Martincorena, ... Nature genetics 52 (3), 342-352, 2020 | 361 | 2020 |
Clonal diversity of recurrently mutated genes in myelodysplastic syndromes MJ Walter, D Shen, J Shao, L Ding, BS White, C Kandoth, CA Miller, B Niu, ... Leukemia 27 (6), 1275-1282, 2013 | 335 | 2013 |
Patterns and functional implications of rare germline variants across 12 cancer types C Lu, M Xie, MC Wendl, J Wang, MD McLellan, MDM Leiserson, K Huang, ... Nature communications 6 (1), 1-13, 2015 | 324 | 2015 |