| Neutralizing antibodies against the SARS-CoV-2 Delta and Omicron variants following heterologous CoronaVac plus BNT162b2 booster vaccination E Pérez-Then, C Lucas, VS Monteiro, M Miric, V Brache, L Cochon, ... Nature medicine 28 (3), 481-485, 2022 | 382 | 2022 |
| Viral dynamics of SARS-CoV-2 variants in vaccinated and unvaccinated persons SM Kissler, JR Fauver, C Mack, CG Tai, MI Breban, AE Watkins, ... New England Journal of Medicine 385 (26), 2489-2491, 2021 | 310* | 2021 |
| Multiplex qPCR discriminates variants of concern to enhance global surveillance of SARS-CoV-2 CBF Vogels, MI Breban, IM Ott, T Alpert, ME Petrone, AE Watkins, ... PLoS biology 19 (5), e3001236, 2021 | 267* | 2021 |
| Impact of circulating SARS-CoV-2 variants on mRNA vaccine-induced immunity C Lucas, CBF Vogels, I Yildirim, JE Rothman, P Lu, V Monteiro, ... Nature 600 (7889), 523-529, 2021 | 233 | 2021 |
| Comparative transmissibility of SARS-CoV-2 variants delta and alpha in New England, USA R Earnest, R Uddin, N Matluk, N Renzette, SE Turbett, KJ Siddle, C Loreth, ... Cell Reports Medicine 3 (4), 2022 | 205 | 2022 |
| Early introductions and transmission of SARS-CoV-2 variant B. 1.1. 7 in the United States T Alpert, AF Brito, E Lasek-Nesselquist, J Rothman, AL Valesano, ... Cell 184 (10), 2595-2604. e13, 2021 | 150 | 2021 |
| Densely sampled viral trajectories suggest longer duration of acute infection with B. 1.1. 7 variant relative to non-B. 1.1. 7 SARS-CoV-2 S Kissler, JR Fauver, C Mack, CG Tai, MI Breban, AE Watkins, ... | 130 | 2021 |
| Rapid emergence of SARS-CoV-2 Omicron variant is associated with an infection advantage over Delta in vaccinated persons C Chaguza, A Coppi, R Earnest, D Ferguson, N Kerantzas, F Warner, ... Med 3 (5), 325-334. e4, 2022 | 89 | 2022 |
| Accelerated SARS-CoV-2 intrahost evolution leading to distinct genotypes during chronic infection C Chaguza, AM Hahn, ME Petrone, S Zhou, D Ferguson, MI Breban, ... Cell Reports Medicine 4 (2), 2023 | 84 | 2023 |
| A stem-loop RNA RIG-I agonist protects against acute and chronic SARS-CoV-2 infection in mice T Mao, B Israelow, C Lucas, CBF Vogels, ML Gomez-Calvo, O Fedorova, ... Journal of Experimental Medicine 219 (1), 2022 | 66* | 2022 |
| Variant abundance estimation for SARS-CoV-2 in wastewater using RNA-Seq quantification JA Baaijens, A Zulli, IM Ott, ME Petrone, T Alpert, JR Fauver, CC Kalinich, ... MedRxiv, 2021 | 37 | 2021 |
| Development of an amplicon-based sequencing approach in response to the global emergence of mpox NFG Chen, C Chaguza, L Gagne, M Doucette, S Smole, E Buzby, J Hall, ... PLoS biology 21 (6), e3002151, 2023 | 36 | 2023 |
| Lineage abundance estimation for SARS-CoV-2 in wastewater using transcriptome quantification techniques JA Baaijens, A Zulli, IM Ott, I Nika, MJ van der Lugt, ME Petrone, T Alpert, ... Genome biology 23 (1), 236, 2022 | 34 | 2022 |
| Usability of saliva collection devices for SARS-CoV-2 diagnostics ME Petrone, D Yolda-Carr, M Breban, H Walsh, O Allicock, AE Watkins, ... medRxiv, 2021.02. 01.21250946, 2021 | 33* | 2021 |
| Immunogenicity of heterologous BNT162b2 booster in fully vaccinated individuals with CoronaVac against SARS-CoV-2 variants Delta and Omicron: the Dominican Republic Experience E Pérez-Then, C Lucas, VS Monteiro, M Miric, V Brache, L Cochon, ... Medrxiv, 2021.12. 27.21268459, 2021 | 32 | 2021 |
| Assessment of clinical effectiveness of BNT162b2 COVID-19 vaccine in US adolescents CR Oliveira, LM Niccolai, H Sheikha, L Elmansy, CC Kalinich, ... JAMA network open 5 (3), e220935-e220935, 2022 | 27 | 2022 |
| A new lineage nomenclature to aid genomic surveillance of dengue virus V Hill, S Cleemput, JS Pereira, RJ Gifford, V Fonseca, H Tegally, AF Brito, ... PLoS Biology 22 (9), e3002834, 2024 | 21 | 2024 |
| Travel surveillance uncovers dengue virus dynamics and introductions in the Caribbean E Taylor-Salmon, V Hill, LM Paul, RT Koch, MI Breban, C Chaguza, ... Nature communications 15 (1), 3508, 2024 | 19 | 2024 |
| Combining genomic and epidemiological data to compare the transmissibility of SARS-CoV-2 variants Alpha and Iota ME Petrone, JE Rothman, MI Breban, IM Ott, A Russell, ... Communications biology 5 (1), 439, 2022 | 18 | 2022 |
| DengueSeq: a pan-serotype whole genome amplicon sequencing protocol for dengue virus CBF Vogels, V Hill, MI Breban, C Chaguza, LM Paul, A Sodeinde, ... BMC genomics 25 (1), 433, 2024 | 14 | 2024 |