Artykuły udostępnione publicznie: - Giovanni BussiWięcej informacji
Niedostępny w żadnym miejscu: 1
Bowl inversion of surface-adsorbed sumanene
R Jaafar, CA Pignedoli, G Bussi, K Ait-Mansour, O Groening, T Amaya, ...
Journal of the American Chemical Society 136 (39), 13666-13671, 2014
Upoważnienia: Swiss National Science Foundation
Dostępne w jakimś miejscu: 53
PLUMED 2: New feathers for an old bird
GA Tribello, M Bonomi, D Branduardi, C Camilloni, G Bussi
Computer Physics Communications 185 (2), 604-613, 2014
Upoważnienia: European Commission, Government of Italy
Enhanced sampling in molecular dynamics using metadynamics, replica-exchange, and temperature-acceleration
C Abrams, G Bussi
Entropy 16 (1), 163-199, 2014
Upoważnienia: US National Institutes of Health, European Commission
RNA structural dynamics as captured by molecular simulations: a comprehensive overview
J Šponer, G Bussi, M Krepl, P Banáš, S Bottaro, RA Cunha, A Gil-Ley, ...
Chemical reviews 118 (8), 4177-4338, 2018
Upoważnienia: US National Institutes of Health, European Commission
Hamiltonian replica exchange in GROMACS: a flexible implementation
G Bussi
Molecular Physics 112 (3-4), 379-384, 2014
Upoważnienia: European Commission
The role of nucleobase interactions in RNA structure and dynamics
S Bottaro, F Di Palma, G Bussi
Nucleic acids research 42 (21), 13306-13314, 2014
Upoważnienia: European Commission
Computer folding of RNA tetraloops: identification of key force field deficiencies
P Kührová, RB Best, S Bottaro, G Bussi, J Šponer, M Otyepka, ...
Journal of Chemical Theory and Computation 12 (9), 4534-4548, 2016
Upoważnienia: US National Institutes of Health, European Commission
Improving the performance of the amber RNA force field by tuning the hydrogen-bonding interactions
P Kuhrova, V Mlynsky, M Zgarbová, M Krepl, G Bussi, RB Best, M Otyepka, ...
Journal of chemical theory and computation 15 (5), 3288-3305, 2019
Upoważnienia: US National Institutes of Health
Conformational ensembles of RNA oligonucleotides from integrating NMR and molecular simulations
S Bottaro, G Bussi, SD Kennedy, DH Turner, K Lindorff-Larsen
Science Advances 4 (5), eaar8521, 2018
Upoważnienia: US National Institutes of Health, Villum Foundation, European Commission
Folding of guanine quadruplex molecules–funnel-like mechanism or kinetic partitioning? An overview from MD simulation studies
J Šponer, G Bussi, P Stadlbauer, P Kührová, P Banáš, B Islam, S Haider, ...
Biochimica et Biophysica Acta (BBA)-General Subjects 1861 (5), 1246-1263, 2017
Upoważnienia: European Commission
Enhanced conformational sampling using replica exchange with collective-variable tempering
A Gil-Ley, G Bussi
Journal of chemical theory and computation 11 (3), 1077-1085, 2015
Upoważnienia: European Commission
Combining simulations and solution experiments as a paradigm for RNA force field refinement
A Cesari, A Gil-Ley, G Bussi
Journal of Chemical Theory and Computation 12 (12), 6192-6200, 2016
Upoważnienia: European Commission
Free Energy Landscape of GAGA and UUCG RNA Tetraloops
S Bottaro, P Banáš, J Sponer, G Bussi
The Journal of Physical Chemistry Letters 7 (20), 4032-4038, 2016
Upoważnienia: European Commission
Reactive force field simulation of proton diffusion in BaZrO3 using an empirical valence bond approach
P Raiteri, JD Gale, G Bussi
Journal of Physics: Condensed Matter 23, 334213, 2011
Upoważnienia: US National Institutes of Health
Barnaba: software for analysis of nucleic acid structures and trajectories
S Bottaro, G Bussi, G Pinamonti, S Reißer, W Boomsma, K Lindorff-Larsen
RNA 25 (2), 219-231, 2019
Upoważnienia: Danish Council for Independent Research, Villum Foundation, European Commission
Unraveling Mg2+–RNA binding with atomistic molecular dynamics
RA Cunha, G Bussi
RNA 23 (5), 628-638, 2017
Upoważnienia: European Commission
Empirical corrections to the Amber RNA force field with Target Metadynamics
A Gil-Ley, S Bottaro, G Bussi
Journal of chemical theory and computation 12 (6), 2790-2798, 2016
Upoważnienia: European Commission
Determination of Structural Ensembles of Proteins: Restraining vs Reweighting
R Rangan, M Bonomi, GT Heller, A Cesari, G Bussi, M Vendruscolo
Journal of chemical theory and computation 14 (12), 6632-6641, 2018
Upoważnienia: Bill & Melinda Gates Foundation
Hairpins participating in folding of human telomeric sequence quadruplexes studied by standard and T-REMD simulations
P Stadlbauer, P Kührová, P Banáš, J Koča, G Bussi, L Trantírek, ...
Nucleic acids research 43 (20), 9626-9644, 2015
Upoważnienia: European Commission
Ligand-induced stabilization of the aptamer terminal helix in the add adenine riboswitch
F Di Palma, F Colizzi, G Bussi
RNA 19 (11), 1517-1524, 2013
Upoważnienia: Government of Italy
Informacje na temat publikacji i finansowania automatycznie określa program komputerowy