James Costello

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James J CollinsMIT; Wyss Institute, Harvard; Broad Institute of MIT & HarvardVerifisert e-postadresse på mit.edu
Robert J. PrillIBM ResearchVerifisert e-postadresse på us.ibm.com
Julio Saez RodriguezHeidelberg UniversityVerifisert e-postadresse på uni-heidelberg.de
Mukesh BansalBristol Myers SquibbVerifisert e-postadresse på bms.com
Daniel MarbachRoche Pharma Research and Early Development, Basel, SwitzerlandVerifisert e-postadresse på roche.com
Garrett DancikProfessor, Eastern Connecticut State UniversityVerifisert e-postadresse på easternct.edu
Laura HeiserAssociate Professor, Oregon Health and Science UniversityVerifisert e-postadresse på ohsu.edu
Kyle R AllisonAssistant Professor, Emory UniversityVerifisert e-postadresse på emory.edu
Manolis KellisProfessor of Computer Science, MIT and Broad InstituteVerifisert e-postadresse på mit.edu
Lawrence KwongMD Anderson Cancer CenterVerifisert e-postadresse på mdanderson.org
Mehmet GönenProfessor of Industrial Engineering and Computational Biology, Koç UniversityVerifisert e-postadresse på ku.edu.tr
Yang XieProfessor, UT Southwestern Medical CenterVerifisert e-postadresse på utsouthwestern.edu
Thomas R. CechDistinguished Professor, Department of Chemistry and Biochemistry, University of Colorado BoulderVerifisert e-postadresse på colorado.edu
Joe GrayBiomedical Engineering, Oregon Health and Science UniversityVerifisert e-postadresse på ohsu.edu
Pablo MeyerResearch Staff Member, IBMVerifisert e-postadresse på us.ibm.com
Joaquin M. EspinosaExecutive Director, Linda Crnic Institute for Down Syndrome, University of ColoradoVerifisert e-postadresse på cuanschutz.edu
Kelly D. SullivanAssociate Professor - Linda Crnic Institute for Down Syndrome - CU AnschutzVerifisert e-postadresse på colorado.edu
Suleiman Ali KhanAmazonVerifisert e-postadresse på amazon.com
Antti HonkelaProfessor, University of HelsinkiVerifisert e-postadresse på helsinki.fi
Yong WangAcademy of Mathematics and Systems Science, Chinese Academy of SciencesVerifisert e-postadresse på amss.ac.cn

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James Costello

University of Colorado Anschutz Medical Campus

Verifisert e-postadresse på ucdenver.edu - Startside

Cancer Systems Biology Functional Genomics Network Inference Data Integration


Tittel Sorter etter sitater Sorter etter år Sorter etter tittel	Sitert av Sitert av	År
Evolution of genes and genomes on the Drosophila phylogeny AG Clark, MB Eisen, DR Smith, CM Bergman, B Oliver, TA Markow, ... Nature 450 (7167), 203-18, 2007	2266	2007
Wisdom of crowds for robust gene network inference D Marbach, JC Costello, R Küffner, NM Vega, RJ Prill, DM Camacho, ... Nature methods 9 (8), 796-804, 2012	1854	2012
Next-generation machine learning for biological networks DM Camacho, KM Collins, RK Powers, JC Costello, JJ Collins Cell 173 (7), 1581-1592, 2018	934	2018
A community effort to assess and improve drug sensitivity prediction algorithms JC Costello, LM Heiser, E Georgii, M Gönen, MP Menden, NJ Wang, ... Nature biotechnology 32 (12), 1202-1212, 2014	796	2014
Bactericidal antibiotics induce mitochondrial dysfunction and oxidative damage in mammalian cells S Kalghatgi, CS Spina, JC Costello, M Liesa, JR Morones-Ramirez, ... Science translational medicine 5 (192), 192ra85-192ra85, 2013	602	2013
Transcriptional profiling of stroma from inflamed and resting lymph nodes defines immunological hallmarks D Malhotra, AL Fletcher, J Astarita, V Lukacs-Kornek, P Tayalia, ... Nature immunology 13 (5), 499-510, 2012	489	2012
Oncogenic NRAS signaling differentially regulates survival and proliferation in melanoma LN Kwong, JC Costello, H Liu, S Jiang, TL Helms, AE Langsdorf, ... Nature medicine 18 (10), 1503-1510, 2012	396	2012
Monocytic subclones confer resistance to venetoclax-based therapy in patients with acute myeloid leukemia S Pei, DA Pollyea, A Gustafson, BM Stevens, M Minhajuddin, R Fu, ... Cancer discovery 10 (4), 536-551, 2020	379	2020
TERT promoter mutations and telomerase reactivation in urothelial cancer S Borah, L Xi, AJ Zaug, NM Powell, GM Dancik, SB Cohen, JC Costello, ... Science 347 (6225), 1006-1010, 2015	351	2015
Tumor-derived cell lines as molecular models of cancer pharmacogenomics A Goodspeed, LM Heiser, JW Gray, JC Costello Molecular Cancer Research 14 (1), 3-13, 2016	342	2016
A community computational challenge to predict the activity of pairs of compounds M Bansal, J Yang, C Karan, MP Menden, JC Costello, H Tang, G Xiao, ... Nature biotechnology 32 (12), 1213-1222, 2014	332	2014
Intrathymic programming of effector fates in three molecularly distinct γδ T cell subtypes K Narayan, KE Sylvia, N Malhotra, CC Yin, G Martens, T Vallerskog, ... Nature immunology 13 (5), 511-518, 2012	228	2012
GSEA-InContext: identifying novel and common patterns in expression experiments RK Powers, A Goodspeed, H Pielke-Lombardo, AC Tan, JC Costello Bioinformatics 34 (13), i555-i564, 2018	199	2018
Crowdsourcing biomedical research: leveraging communities as innovation engines J Saez-Rodriguez, JC Costello, SH Friend, MR Kellen, L Mangravite, ... Nature Reviews Genetics 17 (8), 470-486, 2016	175	2016
Prediction of overall survival for patients with metastatic castration-resistant prostate cancer: development of a prognostic model through a crowdsourced challenge with open … J Guinney, T Wang, TD Laajala, KK Winner, JC Bare, EC Neto, SA Khan, ... The Lancet Oncology 18 (1), 132-142, 2017	167	2017
Consortium D, Kellis M, Collins JJ, Stolovitzky G. Wisdom of crowds for robust gene network inference D Marbach, JC Costello, R Kuffner, NM Vega, RJ Prill, DM Camacho, ... Nat Methods 9 (8), 796-804, 2012	164	2012
“Reverse ecology” and the power of population genomics YF Li, JC Costello, AK Holloway, MW Hahn Evolution 62 (12), 2984-2994, 2008	157	2008
Concurrent alterations in TERT, KDM6A, and the BRCA pathway in bladder cancer ML Nickerson, GM Dancik, KM Im, MG Edwards, S Turan, J Brown, ... Clinical Cancer Research 20 (18), 4935-4948, 2014	130	2014
Transcriptomes of the B and T lineages compared by multiplatform microarray profiling MW Painter, S Davis, RR Hardy, D Mathis, C Benoist, Y Zhou, S Shinton, ... The Journal of Immunology 186 (5), 3047-3057, 2011	130	2011
Inhibition of the CCL2 receptor, CCR2, enhances tumor response to immune checkpoint therapy MM Tu, HA Abdel-Hafiz, RT Jones, A Jean, KJ Hoff, JE Duex, ... Communications Biology 3 (1), 720, 2020	128	2020

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