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Benedikt Kirchner
Benedikt Kirchner
Post-Doc TU München
Verifisert e-postadresse på tum.de
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Evaluation of serum extracellular vesicle isolation methods for profiling miRNAs by next-generation sequencing
D Buschmann, B Kirchner, S Hermann, M Märte, C Wurmser, F Brandes, ...
Journal of extracellular vesicles 7 (1), 1481321, 2018
2352018
Toward reliable biomarker signatures in the age of liquid biopsies-how to standardize the small RNA-Seq workflow
D Buschmann, A Haberberger, B Kirchner, M Spornraft, I Riedmaier, ...
Nucleic Acids Research 44 (13), 5995-6018, 2016
1232016
Cellular and extracellular mi RNA s are blood‐compartment‐specific diagnostic targets in sepsis
M Reithmair, D Buschmann, M Märte, B Kirchner, D Hagl, I Kaufmann, ...
Journal of cellular and molecular medicine 21 (10), 2403-2411, 2017
1162017
The beneficial effect of farm milk consumption on asthma, allergies, and infections: from meta-analysis of evidence to clinical trial
T Brick, K Hettinga, B Kirchner, MW Pfaffl, MJ Ege
The Journal of Allergy and Clinical Immunology: In Practice 8 (3), 878-889. e3, 2020
932020
microRNA in native and processed cow's milk and its implication for the farm milk effect on asthma
B Kirchner, MW Pfaffl, J Dumpler, E von Mutius, MJ Ege
Journal of allergy and clinical immunology 137 (6), 1893-1895. e13, 2016
912016
Optimization of extraction of circulating RNAs from plasma–enabling small RNA sequencing
M Spornraft, B Kirchner, B Haase, V Benes, MW Pfaffl, I Riedmaier
PloS one 9 (9), e107259, 2014
722014
Summary of the ISEV workshop on extracellular vesicles as disease biomarkers, held in Birmingham, UK, during December 2017
A Clayton, D Buschmann, JB Byrd, DRF Carter, L Cheng, C Compton, ...
Journal of extracellular vesicles 7 (1), 1473707, 2018
692018
miRNA92a targets KLF2 and the phosphatase PTEN signaling to promote human T follicular helper precursors in T1D islet autoimmunity
I Serr, RW Fürst, VB Ott, MG Scherm, A Nikolaev, F Gökmen, S Kälin, ...
Proceedings of the National Academy of Sciences 113 (43), E6659-E6668, 2016
612016
A miRNA181a/NFAT5 axis links impaired T cell tolerance induction with autoimmune type 1 diabetes
I Serr, MG Scherm, AM Zahm, J Schug, VK Flynn, M Hippich, S Kälin, ...
Science Translational Medicine 10 (422), eaag1782, 2018
602018
Quantification noise in single cell experiments
M Reiter, B Kirchner, H Müller, C Holzhauer, W Mann, MW Pfaffl
Nucleic acids research 39 (18), e124-e124, 2011
562011
The dynamics of microRNA transcriptome in bovine corpus luteum during its formation, function, and regression
RM Gecaj, CI Schanzenbach, B Kirchner, MW Pfaffl, I Riedmaier, ...
Frontiers in genetics 8, 213, 2017
412017
Can milk cell or skim milk miRNAs be used as biomarkers for early pregnancy detection in cattle?
CI Schanzenbach, B Kirchner, SE Ulbrich, MW Pfaffl
PloS one 12 (2), e0172220, 2017
392017
Diagnostic potential of circulating cell‐free microRNAs for community‐acquired pneumonia and pneumonia‐related sepsis
S Hermann, F Brandes, B Kirchner, D Buschmann, M Borrmann, M Klein, ...
Journal of Cellular and Molecular Medicine 24 (20), 12054-12064, 2020
372020
Extracellular vesicle associated miRNAs regulate signaling pathways involved in COVID-19 pneumonia and the progression to severe acute respiratory corona virus-2 syndrome
AS Meidert, S Hermann, F Brandes, B Kirchner, D Buschmann, JN Billaud, ...
Frontiers in immunology 12, 784028, 2021
342021
Detection of atherosclerosis by small RNA-sequencing analysis of extracellular vesicle enriched serum samples
A Hildebrandt, B Kirchner, AS Meidert, F Brandes, A Lindemann, G Doose, ...
Frontiers in Cell and Developmental Biology 9, 729061, 2021
292021
Obtaining reliable RT-qPCR results in molecular diagnostics—MIQE goals and pitfalls for transcriptional biomarker discovery
C Grätz, MLU Bui, G Thaqi, B Kirchner, RP Loewe, MW Pfaffl
Life 12 (3), 386, 2022
272022
Transcriptomic profiling of cell-free and vesicular microRNAs from matched arterial and venous sera
S Hermann, D Buschmann, B Kirchner, M Borrmann, F Brandes, ...
Journal of Extracellular Vesicles 8 (1), 1670935, 2019
252019
Comparison of the miRNome and piRNome of bovine blood and plasma by small RNA sequencing
M Spornraft, B Kirchner, MW Pfaffl, I Riedmaier
Biotechnology letters 37, 1165-1176, 2015
242015
Postprandial transfer of colostral extracellular vesicles and their protein and miRNA cargo in neonatal calves
B Kirchner, D Buschmann, V Paul, MW Pfaffl
PLoS One 15 (2), e0229606, 2020
232020
Changes in the microRNA expression profile during blood storage
A Haberberger, B Kirchner, I Riedmaier, R Henschler, C Wichmann, ...
BMJ open sport & exercise medicine 4 (1), e000354, 2018
232018
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Artikler 1–20