Jason Sahl

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Paul KeimRegents Professor, Northern Arizona University, TGen, Executive Director of Pathogen and McrobiomeVerifisert e-postadresse på nau.edu
David M. WagnerProfessor of Biological Sciences, Northern Arizona UniversityVerifisert e-postadresse på nau.edu
Talima PearsonResearch Professor, Biological Sciences, Northern Arizona UniversityVerifisert e-postadresse på NAU.edu
Crystal HeppAssociate Professor at Northern Arizona Unversity and the Translational Genomics Research InstituteVerifisert e-postadresse på nau.edu
Nathan StoneNorthern Arizona UniversityVerifisert e-postadresse på nau.edu
Patrick D. SchlossFrederick G Novy Collegiate Professor of Microbiology & Immunology, University of MichiganVerifisert e-postadresse på umich.edu
David EngelthalerDirector, TGen NorthVerifisert e-postadresse på tgen.org
Joseph BuschSenior Research Scientist, Northern Arizona UniversityVerifisert e-postadresse på nau.edu
Bart CurrieProfessor in Medicine, Menzies School of Health Research and Northern Territory Medical Program, Royal Darwin HospitalVerifisert e-postadresse på menzies.edu.au
Jeffrey T. FosterProfessor of Biology, Northern Arizona UniversityVerifisert e-postadresse på nau.edu
Heidie Hornstra O'NeillClinical Study Manager: W. L. Gore & AssociatesVerifisert e-postadresse på nau.edu
Rebecca E. ColmanResearcher, University of California San DiegoVerifisert e-postadresse på ucsd.edu
John R. SpearCivil & Environmental Engineering, Quantitative Biosciences and Eng., Colorado School of MinesVerifisert e-postadresse på mines.edu
Mark MayoMenzies School of Health ResearchVerifisert e-postadresse på menzies.edu.au
J Gregory CaporasoNorthern Arizona UniversityVerifisert e-postadresse på nau.edu
Edward C HolmesUniversity of SydneyVerifisert e-postadresse på sydney.edu.au
Apichai Tuanyok, Ph.D.Associate Professor in Medical MicrobiologyVerifisert e-postadresse på ufl.edu
Junko Munakata MarrCivil and Environmental Engineering, Colorado School of MinesVerifisert e-postadresse på mines.edu
Robert L. Siegrist, Ph.D., P.E., BCEEUniversity Professor Emeritus of ESE, Professor, Civil and Environmental Engineering, ColoradoVerifisert e-postadresse på mines.edu
J. Kirk HarrisAssistant Professor of PediatricsVerifisert e-postadresse på ucdenver.edu

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Jason Sahl

Associate Professor of Biology at Northern Arizona University

Verifisert e-postadresse på nau.edu - Startside

Infectious disease genomics


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Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities PD Schloss, SL Westcott, T Ryabin, JR Hall, M Hartmann, EB Hollister, ... Applied and environmental microbiology 75 (23), 7537-7541, 2009	21795	2009
Origins of the E. coli strain causing an outbreak of hemolytic–uremic syndrome in Germany DA Rasko, DR Webster, JW Sahl, A Bashir, N Boisen, F Scheutz, ... New England Journal of Medicine 365 (8), 709-717, 2011	1098	2011
Yersinia pestis and the Plague of Justinian 541–543 AD: a genomic analysis DM Wagner, J Klunk, M Harbeck, A Devault, N Waglechner, JW Sahl, ... The Lancet infectious diseases 14 (4), 319-326, 2014	596	2014
The large-scale blast score ratio (LS-BSR) pipeline: a method to rapidly compare genetic content between bacterial genomes J Sahl, JG Caporaso, D Rasko, P Keim PeerJ 2 (e332), 2014	275	2014
17th century variola virus reveals the recent history of smallpox AT Duggan, MF Perdomo, D Piombino-Mascali, S Marciniak, D Poinar, ... Current Biology 26 (24), 3407-3412, 2016	258	2016
NASP: an accurate, rapid method for the identification of SNPs in WGS datasets that supports flexible input and output formats JW Sahl, D Lemmer, J Travis, JM Schupp, JD Gillece, M Aziz, EM Driebe, ... Microbial genomics 2 (8), e000074, 2016	247	2016
Best practices for evaluating single nucleotide variant calling methods for microbial genomics ND Olson, SP Lund, RE Colman, JT Foster, JW Sahl, JM Schupp, P Keim, ... Frontiers in genetics 6, 235, 2015	235	2015
Eighteenth century Yersinia pestis genomes reveal the long-term persistence of an historical plague focus KI Bos, A Herbig, J Sahl, N Waglechner, M Fourment, SA Forrest, J Klunk, ... Elife 5, e12994, 2016	203	2016
Chemical sensing in mammalian host–bacterial commensal associations DT Hughes, DA Terekhova, L Liou, CJ Hovde, JW Sahl, AV Patankar, ... Proceedings of the National Academy of Sciences 107 (21), 9831-9836, 2010	158	2010
A Comparative Genomic Analysis of Diverse Clonal Types of Enterotoxigenic Escherichia coli Reveals Pathovar-Specific Conservation JW Sahl, H Steinsland, JC Redman, SV Angiuoli, JP Nataro, ... Infection and immunity 79 (2), 950-960, 2011	156	2011
Evolution of a pathogen: a comparative genomics analysis identifies a genetic pathway to pathogenesis in Acinetobacter JW Sahl, JD Gillece, JM Schupp, VG Waddell, EM Driebe, DM Engelthaler, ... PloS one 8 (1), e54287, 2013	148	2013
Subsurface microbial diversity in deep-granitic-fracture water in Colorado JW Sahl, R Schmidt, ED Swanner, KW Mandernack, AS Templeton, ... Applied and Environmental Microbiology 74 (1), 143-152, 2008	148	2008
Refining the pathovar paradigm via phylogenomics of the attaching and effacing Escherichia coli TH Hazen, JW Sahl, CM Fraser, MS Donnenberg, F Scheutz, DA Rasko Proceedings of the National Academy of Sciences 110 (31), 12810-12815, 2013	128	2013
Comparative Genomics and stx Phage Characterization of LEE-Negative Shiga Toxin-Producing Escherichia coli SR Steyert, JW Sahl, CM Fraser, LD Teel, F Scheutz, DA Rasko Frontiers in cellular and infection microbiology 2, 133, 2012	120	2012
Defining the phylogenomics of Shigella species: a pathway to diagnostics JW Sahl, CR Morris, J Emberger, CM Fraser, JB Ochieng, J Juma, ... Journal of clinical microbiology 53 (3), 951-960, 2015	106	2015
Comparison of normalization methods for construction of large, multiplex amplicon pools for next-generation sequencing JK Harris, JW Sahl, TA Castoe, BD Wagner, DD Pollock, JR Spear Applied and environmental microbiology 76 (12), 3863-3868, 2010	96	2010
Genomic comparison of multi-drug resistant invasive and colonizing Acinetobacter baumannii isolated from diverse human body sites reveals genomic plasticity JW Sahl, JK Johnson, AD Harris, AM Phillippy, WW Hsiao, KA Thom, ... BMC genomics 12, 1-12, 2011	89	2011
Diversity, Virulence, and Antimicrobial Resistance in Isolates From the Newly Emerging Klebsiella pneumoniae ST101 Lineage CC Roe, AJ Vazquez, EP Esposito, R Zarrilli, JW Sahl Frontiers in microbiology 10, 542, 2019	86	2019
Comparative genomic analyses reveal broad diversity in botulinum-toxin-producing Clostridia CHD Williamson, JW Sahl, TJ Smith, G Xie, BT Foley, LA Smith, ... BMC genomics 17, 1-20, 2016	86	2016
A Bacillus anthracis genome sequence from the Sverdlovsk 1979 autopsy specimens JW Sahl, T Pearson, R Okinaka, JM Schupp, JD Gillece, H Heaton, ... MBio 7 (5), 10.1128/mbio. 01501-16, 2016	84	2016

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