| Metrics for GO based protein semantic similarity: a systematic evaluation C Pesquita, D Faria, H Bastos, AEN Ferreira, AO Falcão, FM Couto BMC bioinformatics 9, 1-16, 2008 | 429 | 2008 |
| Evaluating GO-based semantic similarity measures C Pesquita, D Faria, H Bastos, A Falcao, F Couto Proc. 10th Annual Bio-Ontologies Meeting 37 (40), 38, 2007 | 154 | 2007 |
| Mining GO annotations for improving annotation consistency D Faria, A Schlicker, C Pesquita, H Bastos, AEN Ferreira, M Albrecht, ... PloS one 7 (7), e40519, 2012 | 51 | 2012 |
| Unique molecular and functional features of extramedullary hematopoietic stem and progenitor cell reservoirs in humans N Mende, HP Bastos, A Santoro, KT Mahbubani, V Ciaurro, ... Blood, The Journal of the American Society of Hematology 139 (23), 3387-3401, 2022 | 50 | 2022 |
| STAT1 is essential for HSC function and maintains MHCIIhi stem cells that resist myeloablation and neoplastic expansion J Li, MJ Williams, HJ Park, HP Bastos, X Wang, D Prins, NK Wilson, ... Blood, The Journal of the American Society of Hematology 140 (14), 1592-1606, 2022 | 34 | 2022 |
| Chemical entity recognition and resolution to ChEBI T Grego, C Pesquita, HP Bastos, FM Couto International Scholarly Research Notices 2012 (1), 619427, 2012 | 31 | 2012 |
| Hematopoietic stem cells retain functional potential and molecular identity in hibernation cultures CA Oedekoven, M Belmonte, D Bode, FK Hamey, MS Shepherd, JLC Che, ... Stem cell reports 16 (6), 1614-1628, 2021 | 24 | 2021 |
| The stem/progenitor landscape is reshaped in a mouse model of essential thrombocythemia and causes excess megakaryocyte production D Prins, HJ Park, S Watcham, J Li, M Vacca, HP Bastos, A Gerbaulet, ... Science advances 6 (48), eabd3139, 2020 | 23 | 2020 |
| Application of gene ontology to gene identification HP Bastos, B Tavares, C Pesquita, D Faria, FM Couto In Silico Tools for Gene Discovery, 141-157, 2011 | 21 | 2011 |
| Quantitative and molecular differences distinguish adult human medullary and extramedullary haematopoietic stem and progenitor cell landscapes N Mende, HP Bastos, A Santoro, K Sham, KT Mahbubani, A Curd, ... BioRxiv, 2020.01. 26.919753, 2020 | 15 | 2020 |
| Using GO terms to evaluate protein clustering H Bastos, D Faria, C Pesquita, AO Falcão The 10th Annual Bio-Ontologies Meeting, 1, 2007 | 9 | 2007 |
| Chemical and metabolic pathway semantic similarity T Grego, JD Ferreira, C Pesquita, H Bastos, D Vila Viçosa, J Freire, ... | 8 | 2010 |
| Annotation extension through protein family annotation coherence metrics HP Bastos, LA Clarke, FM Couto Frontiers in genetics 4, 201, 2013 | 7 | 2013 |
| Preleukemic single-cell landscapes reveal mutation-specific mechanisms and gene programs predictive of AML patient outcomes T Isobe, I Kucinski, M Barile, X Wang, R Hannah, HP Bastos, S Chabra, ... Cell Genomics 3 (12), 2023 | 6 | 2023 |
| Gryfun: A web application for go term annotation visualization and analysis in protein sets HP Bastos, L Sousa, LA Clarke, FM Couto PloS one 10 (3), e0119631, 2015 | 6 | 2015 |
| Functional coherence metrics in protein families HP Bastos, L Sousa, LA Clarke, FM Couto Journal of Biomedical Semantics 7, 1-11, 2016 | 4 | 2016 |
| Identifying bioentity recognition errors of rule-based text-mining systems FM Couto, T Grego, HP Bastos, C Pesquita, R Torres, P Sánchez, ... 2008 Third International Conference on Digital Information Management, 733-738, 2008 | 4 | 2008 |
| Arabidopsis sirtuins and poly (ADP‐ribose) polymerases regulate gene expression in the day but do not affect circadian rhythms JH Kim, LJ Bell, X Wang, R Wimalasekera, HP Bastos, KA Kelly, ... Plant, Cell & Environment 44 (5), 1451-1467, 2021 | 3 | 2021 |
| The Biomedical Ontology Applications (BOA) framework B Tavares, HP Bastos, D Faria, JD Ferreira, T Grego, C Pesquita, ... | 2 | 2011 |
| Maintenance of haematopoietic stem cells by JAK inhibition and increased tyrosine-unphosphorylated STAT5 MJ Williams, X Wang, HP Bastos, G Grondys-Kotarba, C Johnson, ... bioRxiv, 2024.05. 29.596460, 2024 | 1 | 2024 |
Francisco M CoutoLASIGE, Departamento de Informática, Faculdade de Ciências, Universidade de Lisboa, PortugalVerifisert e-postadresse på campus.ul.pt
