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Haohao Fu
Haohao Fu
Associate Professor of Chemistry, Nankai University
Verifisert e-postadresse på mail.nankai.edu.cn
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Promoting transparency and reproducibility in enhanced molecular simulations
Nature methods 16 (8), 670-673, 2019
7722019
Extended adaptive biasing force algorithm. An on-the-fly implementation for accurate free-energy calculations
H Fu, X Shao, C Chipot, W Cai
Journal of chemical theory and computation 12 (8), 3506-3513, 2016
1432016
Taming rugged free energy landscapes using an average force
H Fu, X Shao, W Cai, C Chipot
Accounts of chemical research 52 (11), 3254-3264, 2019
1242019
Zooming across the free-energy landscape: shaving barriers, and flooding valleys
H Fu, H Zhang, H Chen, X Shao, C Chipot, W Cai
The journal of physical chemistry letters 9 (16), 4738-4745, 2018
1212018
Accurate determination of protein: ligand standard binding free energies from molecular dynamics simulations
H Fu, H Chen, M Blazhynska, E Goulard Coderc de Lacam, ...
Nature protocols 17 (4), 1114-1141, 2022
842022
Breaking through the Size Control Dilemma of Silver Chalcogenide Quantum Dots via Trialkylphosphine-Induced Ripening: Leading to Ag2Te Emitting from 950 to …
ZY Liu, AA Liu, H Fu, QY Cheng, MY Zhang, MM Pan, LP Liu, MY Luo, ...
Journal of the American Chemical Society 143 (32), 12867-12877, 2021
842021
BFEE: A user-friendly graphical interface facilitating absolute binding free-energy calculations
H Fu, JC Gumbart, H Chen, X Shao, W Cai, C Chipot
Journal of chemical information and modeling 58 (3), 556-560, 2018
712018
Finding an optimal pathway on a multidimensional free-energy landscape
H Fu, H Chen, X Wang, H Chai, X Shao, W Cai, C Chipot
Journal of Chemical Information and Modeling 60 (11), 5366-5374, 2020
642020
New coarse variables for the accurate determination of standard binding free energies
H Fu, W Cai, J Hénin, B Roux, C Chipot
Journal of chemical theory and computation 13 (11), 5173-5178, 2017
642017
Sonoporation at small and large length scales: effect of cavitation bubble collapse on membranes
H Fu, J Comer, W Cai, C Chipot
The journal of physical chemistry letters 6 (3), 413-418, 2015
562015
BFEE2: automated, streamlined, and accurate absolute binding free-energy calculations
H Fu, H Chen, W Cai, X Shao, C Chipot
Journal of Chemical Information and Modeling 61 (5), 2116-2123, 2021
552021
Reversible self-assembly of nanoprobes in live cells for dynamic intracellular pH imaging
B Dong, S Du, C Wang, H Fu, Q Li, N Xiao, J Yang, X Xue, W Cai, D Liu
ACS nano 13 (2), 1421-1432, 2019
552019
From material science to avant-garde cuisine. The art of shaping liquids into spheres
H Fu, Y Liu, F Adrià, X Shao, W Cai, C Chipot
The Journal of Physical Chemistry B 118 (40), 11747-11756, 2014
482014
The extended generalized adaptive biasing force algorithm for multidimensional free-energy calculations
T Zhao, H Fu, T Lelièvre, X Shao, C Chipot, W Cai
Journal of Chemical Theory and Computation 13 (4), 1566-1576, 2017
442017
The lubricating role of water in the shuttling of rotaxanes
H Fu, X Shao, C Chipot, W Cai
Chemical Science 8 (7), 5087-5094, 2017
372017
Accurate Description of Cation− π Interactions in Proteins with a Nonpolarizable Force Field at No Additional Cost
H Liu, H Fu, X Shao, W Cai, C Chipot
Journal of Chemical Theory and Computation 16 (10), 6397-6407, 2020
282020
Overcoming free-energy barriers with a seamless combination of a biasing force and a collective variable-independent boost potential
H Chen, H Fu, C Chipot, X Shao, W Cai
Journal of Chemical Theory and Computation 17 (7), 3886-3894, 2021
252021
Lysine mutation of the claw-arm-like loop accelerates catalysis by cellobiohydrolases
Z Zong, Q Li, Z Hong, H Fu, W Cai, C Chipot, H Jiang, D Zhang, S Chen, ...
Journal of the American Chemical Society 141 (36), 14451-14459, 2019
242019
Mechanism and biomass association of glucuronoyl esterase: an α/β hydrolase with potential in biomass conversion
Z Zong, S Mazurkewich, CS Pereira, H Fu, W Cai, X Shao, MS Skaf, ...
Nature Communications 13 (1), 1449, 2022
232022
MLCV: Bridging machine-learning-based dimensionality reduction and free-energy calculation
H Chen, H Liu, H Feng, H Fu, W Cai, X Shao, C Chipot
Journal of Chemical Information and Modeling 62 (1), 1-8, 2021
232021
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