| Definitions and guidelines for research on antibiotic persistence NQ Balaban, S Helaine, K Lewis, M Ackermann, B Aldridge, DI Andersson, ... Nature Reviews Microbiology 17 (7), 441-448, 2019 | 1117 | 2019 |
| Metabolic engineering of Escherichia coli for 1-butanol production S Atsumi, AF Cann, MR Connor, CR Shen, KM Smith, MP Brynildsen, ... Metabolic engineering 10 (6), 305-311, 2008 | 1110 | 2008 |
| Metabolite-enabled eradication of bacterial persisters by aminoglycosides KR Allison, MP Brynildsen, JJ Collins Nature 473 (7346), 216-220, 2011 | 1068 | 2011 |
| Potentiating antibacterial activity by predictably enhancing endogenous microbial ROS production MP Brynildsen, JA Winkler, CS Spina, IC MacDonald, JJ Collins Nature biotechnology 31 (2), 160-165, 2013 | 472 | 2013 |
| Metabolic control of persister formation in Escherichia coli SM Amato, MA Orman, MP Brynildsen Molecular cell 50 (4), 475-487, 2013 | 417 | 2013 |
| The role of metabolism in bacterial persistence SM Amato, CH Fazen, TC Henry, WWK Mok, MA Orman, EL Sandvik, ... Frontiers in microbiology 5, 70, 2014 | 294 | 2014 |
| Dormancy is not necessary or sufficient for bacterial persistence MA Orman, MP Brynildsen Antimicrobial agents and chemotherapy 57 (7), 3230-3239, 2013 | 291 | 2013 |
| An integrated network approach identifies the isobutanol response network of Escherichia coli MP Brynildsen, JC Liao Molecular systems biology 5 (1), 277, 2009 | 245 | 2009 |
| Heterogeneous bacterial persisters and engineering approaches to eliminate them KR Allison, MP Brynildsen, JJ Collins Current opinion in microbiology 14 (5), 593-598, 2011 | 235 | 2011 |
| Enhanced antibiotic resistance development from fluoroquinolone persisters after a single exposure to antibiotic TC Barrett, WWK Mok, AM Murawski, MP Brynildsen Nature communications 10 (1), 1177, 2019 | 181 | 2019 |
| Persister heterogeneity arising from a single metabolic stress SM Amato, MP Brynildsen Current Biology 25 (16), 2090-2098, 2015 | 165 | 2015 |
| Inhibition of stationary phase respiration impairs persister formation in E. coli MA Orman, MP Brynildsen Nature communications 6 (1), 7983, 2015 | 151 | 2015 |
| Establishment of a method to rapidly assay bacterial persister metabolism MA Orman, MP Brynildsen Antimicrobial agents and chemotherapy 57 (9), 4398-4409, 2013 | 144 | 2013 |
| Nutrient transitions are a source of persisters in Escherichia coli biofilms SM Amato, MP Brynildsen PloS one 9 (3), e93110, 2014 | 129 | 2014 |
| Stationary-phase persisters to ofloxacin sustain DNA damage and require repair systems only during recovery KG Völzing, MP Brynildsen MBio 6 (5), 10.1128/mbio. 00731-15, 2015 | 121 | 2015 |
| gNCA: a framework for determining transcription factor activity based on transcriptome: identifiability and numerical implementation LM Tran, MP Brynildsen, KC Kao, JK Suen, JC Liao Metabolic engineering 7 (2), 128-141, 2005 | 120 | 2005 |
| Timing of DNA damage responses impacts persistence to fluoroquinolones WWK Mok, MP Brynildsen Proceedings of the National Academy of Sciences 115 (27), E6301-E6309, 2018 | 101 | 2018 |
| Inferring yeast cell cycle regulators and interactions using transcription factor activities YL Yang, J Suen, MP Brynildsen, SJ Galbraith, JC Liao Bmc Genomics 6, 1-15, 2005 | 84 | 2005 |
| Futile cycling increases sensitivity toward oxidative stress in Escherichia coli KJ Adolfsen, MP Brynildsen Metabolic engineering 29, 26-35, 2015 | 71 | 2015 |
| A Kinetic Platform to Determine the Fate of Nitric Oxide in Escherichia coli JL Robinson, MP Brynildsen PLoS computational biology 9 (5), e1003049, 2013 | 61 | 2013 |
