Rfam 13.0: shifting to a genome-centric resource for non-coding RNA families I Kalvari, J Argasinska, N Quinones-Olvera, EP Nawrocki, E Rivas, ... Nucleic acids research 46 (D1), D335-D342, 2018 | 946 | 2018 |
Non‐coding RNA analysis using the Rfam database I Kalvari, EP Nawrocki, J Argasinska, N Quinones‐Olvera, RD Finn, ... Current protocols in bioinformatics 62 (1), e51, 2018 | 366 | 2018 |
Prophages encode phage-defense systems with cognate self-immunity SV Owen, N Wenner, CL Dulberger, EV Rodwell, A Bowers-Barnard, ... Cell host & microbe 29 (11), 1620-1633. e8, 2021 | 98 | 2021 |
The fitness landscape of the African Salmonella Typhimurium ST313 strain D23580 reveals unique properties of the pBT1 plasmid R Canals, RR Chaudhuri, RE Steiner, SV Owen, N Quinones-Olvera, ... PLoS Pathogens 15 (9), e1007948, 2019 | 30 | 2019 |
Diverse and abundant phages exploit conjugative plasmids N Quinones-Olvera, SV Owen, LM McCully, MG Marin, EA Rand, AC Fan, ... Nature Communications 15 (1), 3197, 2024 | 20 | 2024 |
Efficient and Robust Search of Microbial Genomes via Phylogenetic Compression K Břinda, L Lima, S Pignotti, N Quinones-Olvera, K Salikhov, R Chikhi, ... bioRxiv, 2023.04. 15.536996, 2023 | 8 | 2023 |
Analysis of the limited M. tuberculosis accessory genome reveals potential pitfalls of pan-genome analysis approaches MG Marin, C Wippel, N Quinones-Olvera, M Behruznia, BM Jeffrey, ... bioRxiv, 2024.03. 21.586149, 2024 | 2 | 2024 |
Phage DisCo: targeted discovery of bacteriophages by co-culture EA Rand, SV Owen, N Quinones-Olvera, K Jean, C Hernandez-Perez, ... bioRxiv, 2024.11. 22.624878, 2024 | | 2024 |