ranacapa: An R package and Shiny web app to explore environmental DNA data with exploratory statistics and interactive visualizations GS Kandlikar, ZJ Gold, MC Cowen, RS Meyer, AC Freise, NJB Kraft, ... F1000Research 7, 2018 | 170 | 2018 |
The skin microbiome is different in pediatric versus adult atopic dermatitis B Shi, NJ Bangayan, E Curd, PA Taylor, RL Gallo, DYM Leung, H Li Journal of Allergy and Clinical Immunology 138 (4), 1233-1236, 2016 | 161 | 2016 |
Anacapa Toolkit: An environmental DNA toolkit for processing multilocus metabarcode datasets EE Curd, Z Gold, GS Kandlikar, J Gomer, M Ogden, T O'Connell, L Pipes, ... Methods in Ecology and Evolution 10 (9), 1469-1475, 2019 | 119 | 2019 |
Bacterial diversity is positively correlated with soil heterogeneity EE Curd, JBH Martiny, H Li, TB Smith Ecosphere 9 (1), e02079, 2018 | 96 | 2018 |
Improving metabarcoding taxonomic assignment: A case study of fishes in a large marine ecosystem Z Gold, EE Curd, KD Goodwin, ES Choi, BW Frable, AR Thompson, ... Molecular ecology resources 21 (7), 2546-2564, 2021 | 91 | 2021 |
Mapping the risk of avian influenza in wild birds in the US TL Fuller, SS Saatchi, EE Curd, E Toffelmier, HA Thomassen, ... BMC infectious diseases 10, 1-13, 2010 | 84 | 2010 |
Landscape analyses using eDNA metabarcoding and Earth observation predict community biodiversity in California M Lin, AL Simons, RJ Harrigan, EE Curd, FD Schneider, DV Ruiz‐Ramos, ... Ecological Applications 31 (6), e02379, 2021 | 36 | 2021 |
A pile of pipelines: An overview of the bioinformatics software for metabarcoding data analyses A Hakimzadeh, A Abdala Asbun, D Albanese, M Bernard, D Buchner, ... Molecular Ecology Resources 24 (5), e13847, 2024 | 28 | 2024 |
The CALeDNA program: Citizen scientists and researchers inventory California’s biodiversity RS Meyer, MM Ramos, M Lin, TM Schweizer, Z Gold, DR Ramos, ... California Agriculture 75 (1), 2021 | 27 | 2021 |
A manager’s guide to using eDNA metabarcoding in marine ecosystems Z Gold, AR Wall, TM Schweizer, ND Pentcheff, EE Curd, PH Barber, ... PeerJ 10, e14071, 2022 | 26 | 2022 |
Draft genome sequences of Propionibacterium acnes type strain ATCC6919 and antibiotic-resistant strain HL411PA1 J Liu, A Cheng, NJ Bangayan, E Barnard, E Curd, N Craft, H Li Genome announcements 2 (4), 10.1128/genomea. 00740-14, 2014 | 24 | 2014 |
Conservation of Mojave Desert springs and associated biota: status, threats, and policy opportunities SS Parker, A Zdon, WT Christian, BS Cohen, M Palacios Mejia, NS Fraga, ... Biodiversity and Conservation 30 (2), 311-327, 2021 | 22 | 2021 |
The utility of environmental DNA from sediment and water samples for recovery of observed plant and animal species from four Mojave Desert springs M Palacios Mejia, E Curd, K Edalati, MA Renshaw, R Dunn, D Potter, ... Environmental DNA 3 (1), 214-230, 2021 | 17 | 2021 |
Rapid influenza A detection and quantitation in birds using a one-step real-time reverse transcriptase PCR and High Resolution Melting E Curd, J Pollinger, E Toffelmier, T Smith Journal of virological methods 176 (1-2), 125-130, 2011 | 13 | 2011 |
Soil microbial community composition and tolerance to contaminants in an urban brownfield site MP Mejia, CA Rojas, E Curd, MA Renshaw, K Edalati, B Shih, N Vincent, ... Microbial ecology 85 (3), 998-1012, 2023 | 12 | 2023 |
eDNA metabarcoding bioassessment of endangered fairy shrimp (Branchinecta spp.) Z Gold, AR Wall, EE Curd, RP Kelly, ND Pentcheff, L Ripma, PH Barber, ... Conservation Genetics Resources 12 (4), 685-690, 2020 | 12 | 2020 |
MG-MLST: characterizing the microbiome at the strain level in metagenomic data NJ Bangayan, B Shi, J Trinh, E Barnard, G Kasimatis, E Curd, H Li Microorganisms 8 (5), 684, 2020 | 12 | 2020 |
The California environmental DNA “CALeDNA” program RS Meyer, EE Curd, T Schweizer, Z Gold, DR Ramos, S Shirazi, ... BioRxiv, 503383, 2019 | 11 | 2019 |
Targeted amplification and sequencing of ancient environmental and sedimentary DNA RV Nichols, E Curd, PD Heintzman, B Shapiro Ancient DNA: Methods and Protocols, 149-161, 2019 | 11 | 2019 |
Economic Implications of Optimal Diagnosis and Treatment of Sepsis–Work in Progress: Marginal Penalties, Antibiotic Alterations, and Outcome Hypotheses GJ Kost, Z Tang, NK Tran, EE Curd, RF Louie, TE Albertson, RW Derlet, ... Scandinavian Journal of Clinical and Laboratory Investigation 63 (sup239), 16-26, 2003 | 8 | 2003 |