| The PMDB protein model database T Castrignano, PDO De Meo, D Cozzetto, IG Talamo, A Tramontano Nucleic acids research 34 (suppl_1), D306-D309, 2006 | 358 | 2006 |
| Bioinformatics approaches for genomics and post genomics applications of next-generation sequencing DS Horner, G Pavesi, T Castrignano, PDO De Meo, S Liuni, M Sammeth, ... Briefings in bioinformatics 11 (2), 181-197, 2010 | 255 | 2010 |
| Developmental factor IRF6 exhibits tumor suppressor activity in squamous cell carcinomas E Botti, G Spallone, F Moretti, B Marinari, V Pinetti, S Galanti, ... Proceedings of the National Academy of Sciences 108 (33), 13710-13715, 2011 | 172 | 2011 |
| SpliceAid-F: a database of human splicing factors and their RNA-binding sites GP Matteo Giulietti, Francesco Piva, Mattia D’Antonio, Paolo D’Onorio De Meo ... Nucleic Acids Res 41 ((D1): D125-D131), 2013 | 138 | 2013 |
| REDIportal: millions of novel A-to-I RNA editing events from thousands of RNAseq experiments L Mansi, MA Tangaro, C Lo Giudice, T Flati, E Kopel, AA Schaffer, ... Nucleic acids research 49 (D1), D1012-D1019, 2021 | 109 | 2021 |
| Genome-wide mapping of 8-oxo-7, 8-dihydro-2′-deoxyguanosine reveals accumulation of oxidatively-generated damage at DNA replication origins within transcribed long genes of … S Amente, G Di Palo, G Scala, T Castrignanò, F Gorini, S Cocozza, ... Nucleic acids research 47 (1), 221-236, 2019 | 104 | 2019 |
| RAP: RNA-Seq Analysis Pipeline, a new cloud-based NGS web application M D'Antonio, P D'Onorio De Meo, M Pallocca, E Picardi, AM D'Erchia, ... BMC genomics 16, 1-11, 2015 | 86 | 2015 |
| Che‐1‐induced inhibition of mTOR pathway enables stress‐induced autophagy A Desantis, T Bruno, V Catena, F De Nicola, F Goeman, S Iezzi, C Sorino, ... The EMBO Journal 34 (9), 1214-1230, 2015 | 78 | 2015 |
| Novel cDNAs encoding salivary proteins from the malaria vector Anopheles gambiae A Lanfrancotti, F Lombardo, F Santolamazza, M Veneri, T Castrignanò, ... FEBS letters 517 (1-3), 67-71, 2002 | 68 | 2002 |
| MitoZoa: a curated mitochondrial genome database of metazoans for comparative genomics studies R Lupi, PDO de Meo, E Picardi, M D’Antonio, D Paoletti, T Castrignanò, ... Mitochondrion 10 (2), 192-199, 2010 | 63 | 2010 |
| WEP: a high-performance analysis pipeline for whole-exome data M D'Antonio, P D'Onorio De Meo, D Paoletti, B Elmi, M Pallocca, N Sanna, ... BMC bioinformatics 14, 1-11, 2013 | 60 | 2013 |
| ASPicDB: a database resource for alternative splicing analysis T Castrignanò, M D’Antonio, A Anselmo, D Carrabino, A D’Onorio De Meo, ... Bioinformatics 24 (10), 1300-1304, 2008 | 60 | 2008 |
| MitoZoa 2.0: a database resource and search tools for comparative and evolutionary analyses of mitochondrial genomes in Metazoa P D'Onorio de Meo, M D'Antonio, F Griggio, R Lupi, M Borsani, G Pavesi, ... Nucleic acids research 40 (D1), D1168-D1172, 2012 | 54 | 2012 |
| VDR primary targets by genome-wide transcriptional profiling F Goeman, F De Nicola, PDO De Meo, M Pallocca, B Elmi, T Castrignanò, ... The Journal of steroid biochemistry and molecular biology 143, 348-356, 2014 | 51 | 2014 |
| A gene expression atlas for different kinds of stress in the mouse brain T Flati, S Gioiosa, G Chillemi, A Mele, A Oliverio, C Mannironi, A Rinaldi, ... Scientific Data 7 (1), 437, 2020 | 50 | 2020 |
| ASPicDB: a database of annotated transcript and protein variants generated by alternative splicing PL Martelli, M D’Antonio, P Bonizzoni, T Castrignano, AM D’Erchia, ... Nucleic acids research 39 (suppl_1), D80-D85, 2010 | 49 | 2010 |
| CSTminer: a web tool for the identification of coding and noncoding conserved sequence tags through cross-species genome comparison T Castrignano, A Canali, G Grillo, S Liuni, F Mignone, G Pesole Nucleic Acids Research 32 (suppl_2), W624-W627, 2004 | 43 | 2004 |
| HPC-REDItools: a novel HPC-aware tool for improved large scale RNA-editing analysis CT Flati T, Gioiosa S, Spallanzani N, Tagliaferri I, Diroma MA, Pesole G ... BMC Bioinformatics 21 (10), 1-12, 2020 | 42 | 2020 |
| ELIXIR-IT HPC@ CINECA: high performance computing resources for the bioinformatics community T Castrignanò, S Gioiosa, T Flati, M Cestari, E Picardi, M Chiara, M Fratelli, ... BMC bioinformatics 21, 1-17, 2020 | 42 | 2020 |
| HPC-REDItools: A Novel HPC-aware Tool for Improved Large Scale RNA-editing Analysis T Flati, S Gioiosa, N Spallanzani, I Tagliaferri, MA Diroma, G Pesole, ... bioRxiv, 2020 | 41 | 2020 |
Graziano PesoleProfessor of Molecular Biology, Università degli Studi di Bari and National Research CouncilGeverifieerd e-mailadres voor uniba.it
