| CIDAR MoClo: Improved MoClo Assembly Standard and New E. coli Part Library Enable Rapid Combinatorial Design for Synthetic and Traditional Biology SV Iverson, TL Haddock, J Beal, DM Densmore ACS synthetic biology 5 (1), 99-103, 2016 | 201 | 2016 |
| Robust estimation of bacterial cell count from optical density J Beal, NG Farny, T Haddock-Angelli, V Selvarajah, GS Baldwin, ... Communications biology 3 (1), 512, 2020 | 190 | 2020 |
| An end-to-end workflow for engineering of biological networks from high-level specifications J Beal, R Weiss, D Densmore, A Adler, E Appleton, J Babb, S Bhatia, ... ACS synthetic biology 1 (8), 317-331, 2012 | 112 | 2012 |
| Mouse Intestine Selects Nonmotile flhDC Mutants of Escherichia coli MG1655 with Increased Colonizing Ability and Better Utilization of Carbon Sources MP Leatham, SJ Stevenson, EJ Gauger, KA Krogfelt, JJ Lins, TL Haddock, ... Infection and immunity 73 (12), 8039-8049, 2005 | 105 | 2005 |
| Quantification of bacterial fluorescence using independent calibrants J Beal, T Haddock-Angelli, G Baldwin, M Gershater, A Dwijayanti, ... PloS one 13 (6), e0199432, 2018 | 81 | 2018 |
| Interactive assembly algorithms for molecular cloning E Appleton, J Tao, T Haddock, D Densmore Nature methods 11 (6), 657-662, 2014 | 72 | 2014 |
| Reproducibility of Fluorescent Expression from Engineered Biological Constructs in E. coli J Beal, T Haddock-Angelli, M Gershater, K De Mora, M Lizarazo, ... PloS one 11 (3), e0150182, 2016 | 60 | 2016 |
| Designing reality-based interfaces for experiential bio-design O Shaer, C Valdes, S Liu, K Lu, K Chang, W Xu, TL Haddock, S Bhatia, ... Personal and Ubiquitous Computing 18, 1515-1532, 2014 | 30 | 2014 |
| A software stack for specification and robotic execution of protocols for synthetic biological engineering V Vasilev, C Liu, T Haddock, S Bhatia, A Adler, F Yaman, J Beal, J Babb, ... 3rd international workshop on bio-design automation, 2011 | 28 | 2011 |
| Time to get serious about measurement in synthetic biology J Beal, T Haddock-Angelli, N Farny, R Rettberg Trends in biotechnology 36 (9), 869-871, 2018 | 26 | 2018 |
| Thalassiosira spp. community composition shifts in response to chemical and physical forcing in the northeast Pacific Ocean PD Chappell, LAP Whitney, TL Haddock, S Menden-Deuer, EG Roy, ... Frontiers in microbiology 4, 273, 2013 | 17 | 2013 |
| Comparative analysis of three studies measuring fluorescence from engineered bacterial genetic constructs J Beal, GS Baldwin, NG Farny, M Gershater, T Haddock-Angelli, ... PloS one 16 (6), e0252263, 2021 | 13 | 2021 |
| An end-to-end workflow for engineering of biological networks from high-level specifications ACS Synth J Beal, R Weiss, D Densmore, A Adler, E Appleton, J Babb, S Bhatia, ... Biol 1 (8), 317331, 2012 | 13 | 2012 |
| TASBE: A tool-chain to accelerate synthetic biological engineering J Beal, R Weiss, D Densmore, A Adler, J Babb, S Bhatia, N Davidsohn, ... Proceedings of the 3rd International Workshop on Bio-Design Automation, 19-21, 2011 | 10 | 2011 |
| Experimentally driven verification of synthetic biological circuits B Yordanov, E Appleton, R Ganguly, EA Gol, SB Carr, S Bhatia, ... 2012 Design, Automation & Test in Europe Conference & Exhibition (DATE), 236-241, 2012 | 7 | 2012 |
| Permutation machines S Bhatia, C LaBoda, V Yanez, T Haddock-Angelli, D Densmore ACS Synthetic Biology 5 (8), 827-834, 2016 | 6 | 2016 |
| MoClo planner: Interactive visualization for Modular Cloning bio-design O Shaer, C Valdes, S Liu, K Lu, TL Haddock, S Bhatia, D Densmore, ... 2013 IEEE Symposium on Biological Data Visualization (BioVis), 57-64, 2013 | 6 | 2013 |
| Owl: Electronic Datasheet Generator E Appleton, J Tao, FC Wheatley, DH Desai, TM Lozanoski, PD Shah, ... ACS Synthetic Biology 3 (12), 966-968, 2014 | 5 | 2014 |
| Autieri 770 SM, Conway T, Cohen PS. 2005. Mouse intestine selects nonmotile flhDC mutants of 771 Escherichia coli MG1655 with increased colonizing ability and better … MP Leatham, SJ Stevenson, EJ Gauger, KA Krogfelt, JJ Lins, TL Haddock Infect Immun 73, 8039-8049, 0 | 4 | |
| Applying hardware description languages to genetic circuit design R Ghamari, B Stanton, T Haddock, S Bhatia, K Clancy, T Peterson, ... Boston University, 2011 | 3 | 2011 |
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