オープン アクセスを義務付けられた論文 - Anton Korobeynikov詳細
一般公開: 27 件
Assembling genomes and mini-metagenomes from highly chimeric reads
S Nurk, A Bankevich, D Antipov, A Gurevich, A Korobeynikov, A Lapidus, ...
Research in computational molecular biology., 158–170, 2013
委任: US National Institutes of Health
MGnify: the microbiome analysis resource in 2020
AL Mitchell, A Almeida, M Beracochea, M Boland, J Burgin, G Cochrane, ...
Nucleic acids research 48 (D1), D570-D578, 2020
委任: European Molecular Biology Laboratory, UK Biotechnology and Biological …
Petabase-scale sequence alignment catalyses viral discovery
RC Edgar, B Taylor, V Lin, T Altman, P Barbera, D Meleshko, D Lohr, ...
Nature 602 (7895), 142-147, 2022
委任: Agence Nationale de la Recherche, Government of Spain
Dereplication of microbial metabolites through database search of mass spectra
H Mohimani, A Gurevich, A Shlemov, A Mikheenko, A Korobeynikov, ...
Nature communications 9 (1), 4035, 2018
委任: US National Institutes of Health
Critical assessment of metagenome interpretation: the second round of challenges
F Meyer, A Fritz, ZL Deng, D Koslicki, TR Lesker, A Gurevich, G Robertson, ...
Nature methods 19 (4), 429-440, 2022
委任: US National Science Foundation, US Department of Energy, Swiss National …
MGnify: the microbiome sequence data analysis resource in 2023
L Richardson, B Allen, G Baldi, M Beracochea, ML Bileschi, T Burdett, ...
Nucleic acids research 51 (D1), D753-D759, 2023
委任: European Molecular Biology Laboratory, UK Biotechnology and Biological …
Characterization of cyanobacterial hydrocarbon composition and distribution of biosynthetic pathways
RC Coates, S Podell, A Korobeynikov, A Lapidus, P Pevzner, ...
PloS one 9 (1), e85140, 2014
委任: US National Institutes of Health
Combining mass spectrometric metabolic profiling with genomic analysis: a powerful approach for discovering natural products from cyanobacteria
K Kleigrewe, J Almaliti, IY Tian, RB Kinnel, A Korobeynikov, EA Monroe, ...
Journal of natural Products 78 (7), 1671-1682, 2015
委任: US National Institutes of Health
Generating lineage-resolved, complete metagenome-assembled genomes from complex microbial communities
DM Bickhart, M Kolmogorov, E Tseng, DM Portik, A Korobeynikov, ...
Nature biotechnology 40 (5), 711-719, 2022
委任: US National Science Foundation, US Department of Defense, US National …
Multivariate and 2D extensions of singular spectrum analysis with the Rssa package
N Golyandina, A Korobeynikov, A Shlemov, K Usevich
Journal of Statistical Software 67, 1-78, 2015
委任: European Commission
ExSPAnder: a universal repeat resolver for DNA fragment assembly
AD Prjibelski, I Vasilinetc, A Bankevich, A Gurevich, T Krivosheeva, ...
Bioinformatics 30 (12), i293-i301, 2014
委任: US National Institutes of Health
Comparative genomics uncovers the prolific and distinctive metabolic potential of the cyanobacterial genus Moorea
T Leao, G Castelão, A Korobeynikov, EA Monroe, S Podell, E Glukhov, ...
Proceedings of the National Academy of Sciences 114 (12), 3198-3203, 2017
委任: US National Institutes of Health
Increased diversity of peptidic natural products revealed by modification-tolerant database search of mass spectra
A Gurevich, A Mikheenko, A Shlemov, A Korobeynikov, H Mohimani, ...
Nature microbiology 3 (3), 319-327, 2018
委任: US National Institutes of Health
Sequencing rare marine actinomycete genomes reveals high density of unique natural product biosynthetic gene clusters
MA Schorn, MM Alanjary, K Aguinaldo, A Korobeynikov, S Podell, N Patin, ...
Microbiology 162 (12), 2075-2086, 2016
委任: US Department of Energy, US National Institutes of Health, German Research …
MetaMiner: a scalable peptidogenomics approach for discovery of ribosomal peptide natural products with blind modifications from microbial communities
L Cao, A Gurevich, KL Alexander, CB Naman, T Leão, E Glukhov, ...
Cell systems 9 (6), 600-608. e4, 2019
委任: US National Science Foundation, US National Institutes of Health, US …
BiosyntheticSPAdes: reconstructing biosynthetic gene clusters from assembly graphs
D Meleshko, H Mohimani, V Tracanna, I Hajirasouliha, MH Medema, ...
Genome research 29 (8), 1352-1362, 2019
委任: US National Institutes of Health, Netherlands Organisation for Scientific …
coronaSPAdes: from biosynthetic gene clusters to RNA viral assemblies
D Meleshko, I Hajirasouliha, A Korobeynikov
Bioinformatics 38 (1), 1-8, 2022
委任: US National Institutes of Health
Spongosine Production by a Vibrio harveyi Strain Associated with the Sponge Tectitethya crypta
MJ Bertin, SL Schwartz, J Lee, A Korobeynikov, PC Dorrestein, L Gerwick, ...
Journal of natural products 78 (3), 493-499, 2015
委任: US National Institutes of Health
The Phormidolide Biosynthetic Gene Cluster: A trans‐AT PKS Pathway Encoding a Toxic Macrocyclic Polyketide
MJ Bertin, A Vulpanovici, EA Monroe, A Korobeynikov, DH Sherman, ...
ChemBioChem 17 (2), 164-173, 2016
委任: US National Institutes of Health
Expanding the described metabolome of the marine cyanobacterium Moorea producens JHB through orthogonal natural products workflows
PD Boudreau, EA Monroe, S Mehrotra, S Desfor, A Korobeynikov, ...
PLoS One 10 (7), e0133297, 2015
委任: US National Institutes of Health
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