オープン アクセス

The role of REST in transcriptional and epigenetic dysregulation in Huntington's disease

NJ Buckley, R Johnson, C Zuccato, A Bithell, E Cattaneo

Neurobiology of disease 39 (1), 28-39, 2010

委任: Fondazione Telethon, Italy

Targeting and engineering long non-coding RNAs for cancer therapy

M Coan, S Haefliger, S Ounzain, R Johnson

Nature Reviews Genetics, 1-18, 2024

委任: Science Foundation Ireland, European Commission, Irish Research Council

Perspectives on ENCODE

F Abascal, R Acosta, NJ Addleman, J Adrian, V Afzal, B Aken, JA Akiyama

Nature 583 (7818), 693-699, 2020

委任: US National Institutes of Health

一般公開: 73 件

[HTML] nih.gov

An integrated encyclopedia of DNA elements in the human genome

ENCODE Project Consortium

Nature 489 (7414), 57, 2012

委任: US National Institutes of Health

Landscape of transcription in human cells

S Djebali, CA Davis, A Merkel, A Dobin, T Lassmann, A Mortazavi, ...

Nature 489 (7414), 101-108, 2012

委任: Swiss National Science Foundation, US National Institutes of Health …

The GENCODE v7 catalog of human long noncoding RNAs: analysis of their gene structure, evolution, and expression

T Derrien, R Johnson, G Bussotti, A Tanzer, S Djebali, H Tilgner, ...

Genome research 22 (9), 1775-1789, 2012

委任: US National Institutes of Health, Government of Spain

[PDF] oup.com

GENCODE reference annotation for the human and mouse genomes

A Frankish, M Diekhans, AM Ferreira, R Johnson, I Jungreis, J Loveland, ...

Nucleic acids research 47 (D1), D766-D773, 2019

委任: Swiss National Science Foundation, US National Institutes of Health …

Pan-cancer analysis of whole genomes

Nature 578 (7793), 82-93, 2020

委任: US National Institutes of Health, Cancer Research UK, UK Medical Research …

Expanded encyclopaedias of DNA elements in the human and mouse genomes

JE Moore, MJ Purcaro, HE Pratt, CB Epstein, N Shoresh, J Adrian, T Kawli, ...

Nature 583 (7818), 699-710, 2020

委任: US Department of Energy, US National Institutes of Health, UK Biotechnology …

[HTML] nih.gov

The human transcriptome across tissues and individuals

M Melé, PG Ferreira, F Reverter, DS DeLuca, J Monlong, M Sammeth, ...

Science 348 (6235), 660-665, 2015

委任: Swiss National Science Foundation, US National Institutes of Health …

[HTML] oup.com

GENCODE 2021

A Frankish, M Diekhans, I Jungreis, J Lagarde, JE Loveland, JM Mudge, ...

Nucleic acids research 49 (D1), D916-D923, 2021

委任: Swiss National Science Foundation, US National Institutes of Health …

[HTML] nature.com

Long non-coding RNAs: definitions, functions, challenges and recommendations

JS Mattick, PP Amaral, P Carninci, S Carpenter, HY Chang, LL Chen, ...

Nature reviews Molecular cell biology 24 (6), 430-447, 2023

委任: US National Institutes of Health, UK Biotechnology and Biological Sciences …

[HTML] nih.gov

Towards a complete map of the human long non-coding RNA transcriptome

B Uszczynska-Ratajczak, J Lagarde, A Frankish, R Guigó, R Johnson

Nature Reviews Genetics 19 (9), 535-548, 2018

委任: Swiss National Science Foundation, US National Institutes of Health …

Analyses of non-coding somatic drivers in 2,658 cancer whole genomes

E Rheinbay, MM Nielsen, F Abascal, JA Wala, O Shapira, G Tiao, ...

Nature 578 (7793), 102-111, 2020

委任: US National Institutes of Health, Danish Council for Independent Research …

Deep sequencing of subcellular RNA fractions shows splicing to be predominantly co-transcriptional in the human genome but inefficient for lncRNAs

H Tilgner, DG Knowles, R Johnson, CA Davis, S Chakrabortty, S Djebali, ...

Genome research 22 (9), 1616-1625, 2012

委任: US National Institutes of Health, Government of Spain

Genome-wide computational identification and manual annotation of human long noncoding RNA genes

H Jia, M Osak, GK Bogu, LW Stanton, R Johnson, L Lipovich

Rna 16 (8), 1478-1487, 2010

委任: US National Institutes of Health

The RIDL hypothesis: transposable elements as functional domains of long noncoding RNAs

R Johnson, R Guigó

Rna 20 (7), 959-976, 2014

委任: US National Institutes of Health, Government of Spain

LncATLAS database for subcellular localization of long noncoding RNAs

D Mas-Ponte, J Carlevaro-Fita, E Palumbo, TH Pulido, R Guigo, ...

Rna 23 (7), 1080-1087, 2017

委任: Swiss National Science Foundation, Government of Spain

[PDF] oup.com

Genome-wide profiling of the cardiac transcriptome after myocardial infarction identifies novel heart-specific long non-coding RNAs

S Ounzain, R Micheletti, T Beckmann, B Schroen, M Alexanian, I Pezzuto, ...

European heart journal 36 (6), 353-368, 2015

委任: Swiss National Science Foundation

[PDF] cell.com