| Bioconda: sustainable and comprehensive software distribution for the life sciences B Grüning, R Dale, A Sjödin, BA Chapman, J Rowe, CH Tomkins-Tinch, ... Nature methods 15 (7), 475-476, 2018 | 1284 | 2018 |
| GA4GH: International policies and standards for data sharing across genomic research and healthcare HL Rehm, AJH Page, L Smith, JB Adams, G Alterovitz, LJ Babb, ... Cell genomics 1 (2), 2021 | 196 | 2021 |
| Experiences with workflows for automating data-intensive bioinformatics O Spjuth, E Bongcam-Rudloff, GC Hernández, L Forer, M Giovacchini, ... Biology direct 10, 1-12, 2015 | 89 | 2015 |
| bcbio-nextgen: Automated, distributed next-gen sequencing pipeline RV Guimera EMBnet. journal 17 (B), 30, 2011 | 55 | 2011 |
| Community-driven development for computational biology at Sprints, Hackathons and Codefests S Möller, E Afgan, M Banck, RJP Bonnal, T Booth, J Chilton, PJA Cock, ... BMC bioinformatics 15, 1-7, 2014 | 53 | 2014 |
| Journal of Open Source Software (JOSS): design and first-year review AM Smith, KE Niemeyer, DS Katz, LA Barba, G Githinji, M Gymrek, ... PeerJ Computer Science 4, e147, 2018 | 43 | 2018 |
| Fastphylo: fast tools for phylogenetics MA Khan, I Elias, E Sjölund, K Nylander, RV Guimera, R Schobesberger, ... BMC bioinformatics 14, 1-9, 2013 | 25 | 2013 |
| bcbio/bcbio-nextgen: v1. 2.3 B Chapman, R Kirchner, L Pantano, S Naumenko, MD Smet, L Beltrame, ... Zenodo, 2020 | 22 | 2020 |
| Common workflow language, draft 3 P Amstutz, R Andeer, B Chapman, J Chilton, MR Crusoe, R Valls Guimera, ... | 10 | 2016 |
| Sprints, Hackathons and Codefests as community gluons in computational biology S Möller, E Afgan, M Banck, PJA Cock, M Kalas, L Kajan, P Prins, J Quinn, ... EMBnet. journal 19 (B), 40-42, 2013 | 9 | 2013 |
| Arteria: An automation system for a sequencing core facility J Dahlberg, J Hermansson, S Sturlaugsson, M Lysenkova, P Smeds, ... GigaScience 8 (12), giz135, 2019 | 3 | 2019 |
| The Journal of Open Source Software AM Smith, LA Barba, G Githinji, M Gymrek, K Huff, DS Katz, C Madan, ... | 2 | 2017 |
| Enabling Automatic Data Analysis in Bioinformatics Core Facilities RV Guimera A high-throughput sequencing pipeline, 2012 | 2 | 2012 |
| Giving software its due through community-driven review and publication LA Barba, J Bazán, J Brown, RV Guimera, M Gymrek, A Hanna, L Heagy, ... OSF, 2019 | 1 | 2019 |
| SIAM CSE 2019 Minisymposterium: The Journal of Open Source Software A Smith, LA Barba, DS Katz, K Niemeyer, T Allard, J Bazan, J Brown, ... | | 2019 |
| Enabling Automatic Data Analysis in Bioinformatics Core Facilities–A high-throughput sequencing pipeline. R Valls Guimerà | | 2012 |
| LISA’05: 19th Large Installation System Administration Conference A Boster, AR Butt, S Büttcher, L Carriere, M Chiarini, T Denehy, M Disney, ... | | 2005 |
| Facilitera automatisk dataanalys i bioinformatisk core facilities RV Guimera | | |
