| MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0 K Tamura, J Dudley, M Nei, S Kumar Molecular biology and evolution 24 (8), 1596-1599, 2007 | 35743 | 2007 |
| MEGA: a biologist-centric software for evolutionary analysis of DNA and protein sequences S Kumar, M Nei, J Dudley, K Tamura Briefings in bioinformatics 9 (4), 299-306, 2008 | 4238 | 2008 |
| Deep learning for healthcare: review, opportunities and challenges R Miotto, F Wang, S Wang, X Jiang, JT Dudley Briefings in bioinformatics 19 (6), 1236-1246, 2018 | 3125 | 2018 |
| Deep patient: an unsupervised representation to predict the future of patients from the electronic health records R Miotto, L Li, BA Kidd, JT Dudley Scientific reports 6 (1), 26094, 2016 | 1908 | 2016 |
| Personal omics profiling reveals dynamic molecular and medical phenotypes R Chen, GI Mias, J Li-Pook-Than, L Jiang, HYK Lam, R Chen, E Miriami, ... Cell 148 (6), 1293-1307, 2012 | 1436 | 2012 |
| TimeTree: a public knowledge-base of divergence times among organisms SB Hedges, J Dudley, S Kumar Bioinformatics 22 (23), 2971-2972, 2006 | 1340 | 2006 |
| Artificial intelligence in cardiology KW Johnson, J Torres Soto, BS Glicksberg, K Shameer, R Miotto, M Ali, ... Journal of the American College of Cardiology 71 (23), 2668-2679, 2018 | 1160 | 2018 |
| Gene expression elucidates functional impact of polygenic risk for schizophrenia M Fromer, P Roussos, SK Sieberts, JS Johnson, DH Kavanagh, ... Nature neuroscience 19 (11), 1442-1453, 2016 | 1157 | 2016 |
| Discovery and preclinical validation of drug indications using compendia of public gene expression data M Sirota, JT Dudley, J Kim, AP Chiang, AA Morgan, A Sweet-Cordero, ... Science translational medicine 3 (96), 96ra77-96ra77, 2011 | 894 | 2011 |
| Clinical assessment incorporating a personal genome EA Ashley, AJ Butte, MT Wheeler, R Chen, TE Klein, FE Dewey, ... The Lancet 375 (9725), 1525-1535, 2010 | 821 | 2010 |
| Multiscale analysis of independent Alzheimer’s cohorts finds disruption of molecular, genetic, and clinical networks by human herpesvirus B Readhead, JV Haure-Mirande, CC Funk, MA Richards, P Shannon, ... Neuron 99 (1), 64-82. e7, 2018 | 705 | 2018 |
| Computational repositioning of the anticonvulsant topiramate for inflammatory bowel disease JT Dudley, M Sirota, M Shenoy, RK Pai, S Roedder, AP Chiang, ... Science translational medicine 3 (96), 96ra76-96ra76, 2011 | 664 | 2011 |
| Identification of type 2 diabetes subgroups through topological analysis of patient similarity L Li, WY Cheng, BS Glicksberg, O Gottesman, R Tamler, R Chen, ... Science translational medicine 7 (311), 311ra174-311ra174, 2015 | 658 | 2015 |
| Exploiting drug–disease relationships for computational drug repositioning JT Dudley, T Deshpande, AJ Butte Briefings in bioinformatics 12 (4), 303-311, 2011 | 649 | 2011 |
| Machine learning in cardiovascular medicine: are we there yet? K Shameer, KW Johnson, BS Glicksberg, JT Dudley, PP Sengupta Heart 104 (14), 1156-1164, 2018 | 533 | 2018 |
| Natural language processing of clinical notes on chronic diseases: systematic review S Sheikhalishahi, R Miotto, JT Dudley, A Lavelli, F Rinaldi, V Osmani JMIR medical informatics 7 (2), e12239, 2019 | 495 | 2019 |
| Machine-learning algorithms to automate morphological and functional assessments in 2D echocardiography S Narula, K Shameer, AM Salem Omar, JT Dudley, PP Sengupta Journal of the American College of Cardiology 68 (21), 2287-2295, 2016 | 422 | 2016 |
| Necroptosis activation in Alzheimer's disease A Caccamo, C Branca, IS Piras, E Ferreira, MJ Huentelman, WS Liang, ... Nature neuroscience 20 (9), 1236-1246, 2017 | 412 | 2017 |
| A drug repositioning approach identifies tricyclic antidepressants as inhibitors of small cell lung cancer and other neuroendocrine tumors NS Jahchan, JT Dudley, PK Mazur, N Flores, D Yang, A Palmerton, ... Cancer discovery 3 (12), 1364-1377, 2013 | 405 | 2013 |
| Network-based elucidation of human disease similarities reveals common functional modules enriched for pluripotent drug targets S Suthram, JT Dudley, AP Chiang, R Chen, TJ Hastie, AJ Butte PLoS computational biology 6 (2), e1000662, 2010 | 381 | 2010 |
Ben ReadheadASU-Banner, Neurodegenerative Disease Research Center確認したメール アドレス: asu.edu
Shameer Khader, PhD, MPHExecutive Director (Data Science, Machine Learning, Digital Health and Bioinformatics), Sanofi確認したメール アドレス: sanofi.com
Benjamin GlicksbergVP Data Science & Machine Learning, Character Biosciences | Adjunct Professor, Icahn School of確認したメール アドレス: mssm.edu
Brian A. KiddScientific Senior Director, Predictive Sciences at Bristol-Myers Squibb確認したメール アドレス: bms.com
Atul J. ButteDirector, Bakar Computational Health Sciences Institute, University of California, San Francisco確認したメール アドレス: ucsf.edu
Li LiSVP Clinical Informatics, Sema4; Assistant Professor, Mount Sinai School of Medicine確認したメール アドレス: sema4.com
Sudhir KumarDirector, iGEM, Carnell Professor of Biology, Temple University確認したメール アドレス: temple.edu
Riccardo Miotto, PhDSenior Director, Machine Learning @ Tempus AI確認したメール アドレス: tempus.com
Eric SchadtProfessor of Genetics and Genomic Sciences, Mount Sinai School of Medicine確認したメール アドレス: mssm.edu
Koichiro TamuraDirector, Professor, Research Center for Genomics and Bioinformatics, Tokyo Metropolitan University確認したメール アドレス: tmu.ac.jp
Rong ChenDirector of Clinical Genome Informatics & Assistant Professor, Mount Sinai School of Medicine確認したメール アドレス: mssm.edu
Masatoshi NeiLaura Carnell Professor of Biology, Temple University確認したメール アドレス: temple.edu
Alexander A MorganKhosla Ventures確認したメール アドレス: stanford.edu
Nicholas P TatonettiProfessor and Vice Chair of Computational Biomedicine, Cedars-Sinai Medical Center確認したメール アドレス: cshs.org
Andrew KasarskisChief Data Officer, Sema4確認したメール アドレス: sema4.com
irina budunovaprofessor of dermatology , Northwestern University確認したメール アドレス: northwestern.eduNigam ShahProfessor of Medicine, and Biomedical Data Science, Stanford University確認したメール アドレス: stanford.edu
Konrad KarczewskiAssistant Professor, Massachusetts General Hospital; Computational Biologist, Broad Institute確認したメール アドレス: broadinstitute.org
Marina SirotaProfessor, Acting Director, Bakar Computational Health Sciences Institute, UCSF確認したメール アドレス: ucsf.edu
Ke (Corey) XuBioinformatics Research Scientist, St. Jude Children's Research Hospital確認したメール アドレス: stjude.org
