עקוב אחר
Satria A Kautsar
Satria A Kautsar
Joint Genome Institute / Berkeley Lab
כתובת אימייל מאומתת בדומיין lbl.gov
כותרת
צוטט על ידי
צוטט על ידי
שנה
antiSMASH 4.0—improvements in chemistry prediction and gene cluster boundary identification‏
K Blin, T Wolf, MG Chevrette, X Lu, CJ Schwalen, SA Kautsar, ...‏
Nucleic acids research 45 (W1), W36-W41, 2017‏
12982017
A computational framework to explore large-scale biosynthetic diversity‏
JC Navarro-Muñoz, N Selem-Mojica, MW Mullowney, SA Kautsar, ...‏
Nature chemical biology 16 (1), 60-68, 2020‏
7772020
MIBiG 2.0: a repository for biosynthetic gene clusters of known function‏
SA Kautsar, K Blin, S Shaw, JC Navarro-Muñoz, BR Terlouw, ...‏
Nucleic acids research 48 (D1), D454-D458, 2020‏
6572020
MIBiG 3.0: a community-driven effort to annotate experimentally validated biosynthetic gene clusters‏
BR Terlouw, K Blin, JC Navarro-Munoz, NE Avalon, MG Chevrette, ...‏
Nucleic acids research 51 (D1), D603-D610, 2023‏
2912023
plantiSMASH: automated identification, annotation and expression analysis of plant biosynthetic gene clusters‏
SA Kautsar, HG Suarez Duran, K Blin, A Osbourn, MH Medema‏
Nucleic acids research 45 (W1), W55-W63, 2017‏
2762017
Biosynthetic potential of the global ocean microbiome‏
L Paoli, HJ Ruscheweyh, CC Forneris, F Hubrich, S Kautsar, A Bhushan, ...‏
Nature 607 (7917), 111-118, 2022‏
2702022
Compendium of specialized metabolite biosynthetic diversity encoded in bacterial genomes‏
A Gavriilidou, SA Kautsar, N Zaburannyi, D Krug, R Müller, MH Medema, ...‏
Nature microbiology 7 (5), 726-735, 2022‏
2282022
BiG-FAM: the biosynthetic gene cluster families database‏
SA Kautsar, K Blin, S Shaw, T Weber, MH Medema‏
Nucleic acids research 49 (D1), D490-D497, 2021‏
1962021
BiG-SLiCE: A highly scalable tool maps the diversity of 1.2 million biosynthetic gene clusters‏
SA Kautsar, JJJ van der Hooft, D de Ridder, MH Medema‏
Gigascience 10 (1), giaa154, 2021‏
1722021
Artificial intelligence for natural product drug discovery‏
MW Mullowney, KR Duncan, SS Elsayed, N Garg, JJJ van der Hooft, ...‏
Nature Reviews Drug Discovery 22 (11), 895-916, 2023‏
1582023
The antiSMASH database version 3: increased taxonomic coverage and new query features for modular enzymes‏
K Blin, S Shaw, SA Kautsar, MH Medema, T Weber‏
Nucleic acids research 49 (D1), D639-D643, 2021‏
1542021
Unearthing a sesterterpene biosynthetic repertoire in the Brassicaceae through genome mining reveals convergent evolution‏
AC Huang, SA Kautsar, YJ Hong, MH Medema, AD Bond, DJ Tantillo, ...‏
Proceedings of the National Academy of Sciences 114 (29), E6005-E6014, 2017‏
1342017
Microbial natural product databases: moving forward in the multi-omics era‏
JA Van Santen, SA Kautsar, MH Medema, RG Linington‏
Natural Product Reports 38 (1), 264-278, 2021‏
762021
Discovery and biosynthesis of cyclic plant peptides via autocatalytic cyclases‏
DN Chigumba, LS Mydy, F de Waal, W Li, K Shafiq, JW Wotring, ...‏
Nature Chemical Biology 18 (1), 18-28, 2022‏
552022
Genomic identification and analysis of specialized metabolite biosynthetic gene clusters in plants using PlantiSMASH‏
SA Kautsar, HG Suarez Duran, MH Medema‏
Plant Chemical Genomics: Methods and Protocols, 173-188, 2018‏
122018
iPRESTO: Automated discovery of biosynthetic sub-clusters linked to specific natural product substructures‏
JJR Louwen, SA Kautsar, S van der Burg, MH Medema, JJJ van der Hooft‏
PLOS Computational Biology 19 (2), e1010462, 2023‏
92023
BGC Atlas: a web resource for exploring the global chemical diversity encoded in bacterial genomes‏
C Bağcı, M Nuhamunada, H Goyat, C Ladanyi, L Sehnal, K Blin, ...‏
Nucleic acids research 53 (D1), D618-D624, 2025‏
72025
The secondary metabolism collaboratory: a database and web discussion portal for secondary metabolite biosynthetic gene clusters‏
DW Udwary, DT Doering, B Foster, T Smirnova, SA Kautsar, NJ Mouncey‏
Nucleic Acids Research 53 (D1), D717-D723, 2025‏
42025
The Natural Products Discovery Center: Release of the first 8490 sequenced strains for exploring Actinobacteria biosynthetic diversity‏
E Kalkreuter, SA Kautsar, D Yang, CD Bader, CN Teijaro, LL Fluegel, ...‏
bioRxiv, 2023.12. 14.571759, 2024‏
42024
M.Sc., Thesis: An application framework for evaluating methods in biometrics systems‏
SA Kautsar, S Akbar, FN Azizah‏
2014 International Conference on Data and Software Engineering (ICODSE), 1-6, 2014‏
22014
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מאמרים 1–20