Machine learning-guided evaluation of extraction and simulation methods for cancer patient-specific metabolic models SM Lee†, GR Lee†, HU Kim Computational and Structural Biotechnology Journal 20, 3041-3052, 2022 | 13 | 2022 |
Systematic and Comparative Evaluation of Software Programs for Template‐Based Modeling of Protein Structures WD Jang†, SM Lee†, HU Kim, SY Lee Biotechnology Journal 15 (6), 1900343, 2020 | 7 | 2020 |
Development of computational models using omics data for the identification of effective cancer metabolic biomarkers SM Lee, HU Kim Molecular Omics 17 (6), 881-893, 2021 | 5 | 2021 |
A contribution of metabolic engineering to addressing medical problems: Metabolic flux analysis GR Lee†, SM Lee†, HU Kim Metabolic Engineering, 2023 | 4 | 2023 |
Frog analysis ensures the reproducibility of genome scale metabolic models K Raman, M Kratochvil, BG Olivier, M König, P Sengupta, ... bioRxiv, 2024.09. 24.614797, 2024 | 3 | 2024 |
Prediction of metabolites associated with somatic mutations in cancers by using genome-scale metabolic models and mutation data GR Lee†, SM Lee†, S Lee, CW Jeong, H Song, SY Lee, H Yun, Y Koh, ... Genome Biology 25 (1), 66, 2024 | 3 | 2024 |
Systematic analysis of Mendelian disease-associated gene variants reveals new classes of cancer-predisposing genes S Song, Y Koh, S Kim, SM Lee, HU Kim, JM Ko, SH Lee, SS Yoon, S Park Genome Medicine 15 (1), 107, 2023 | 1 | 2023 |
Systematic Prediction of Metabolites and Metabolic Pathways Associated with Somatic Mutations in Cancers Using Genome-scale Metabolic Models LEE GaRyoung, SM Lee, LEE Sungyoung, CW Jeong, S Hyojin, SY Lee, ... 한국생물공학회 학술대회, 598-598, 2023 | | 2023 |
Prediction of Treatment Targets for Cancer Patients with Poor Prognosis by Using Personalized Genome-Scale Metabolic Models SM Lee, LEE GaRyoung, HU Kim 한국생물공학회 학술대회, 599-599, 2023 | | 2023 |
Prediction of metabolic drug targets for cancer patients with poor prognosis by using genome-scale metabolic models and survival analyses SM Lee, GR Lee, HU Kim Cancer Research 83 (7_Supplement), 3149-3149, 2023 | | 2023 |
Systematic Comparison and Evaluation of Template-based Protein Structure Modeling Software Programs WD JANG, SM LEE, RYU Gahyeon, HU KIM, SY LEE 한국생물공학회 학술대회, 624-624, 2023 | | 2023 |
Systematic analysis of disease-linked rare germline variants reveals new classes of cancer predisposing genes S Song, Y Koh, S Kim, SM Lee, HU Kim, JM Ko, SH Lee, SS Yoon, S Park bioRxiv, 2023.02. 15.528610, 2023 | | 2023 |
Computational framework for predicting metabolic drug targets for cancer patients with poor prognosis SM Lee, GR Lee, HU Kim 9th Metabolic Pathway Analysis Conference, MPA 2023, 2023 | | 2023 |
Computational framework for predicting metabolites associated with somatic mutations in cancer using a genome-scale metabolic model GR Lee, SM Lee, S Lee, CW Jeong, H Song, SY Lee, H Yun, Y Koh, ... 9th Metabolic Pathway Analysis Conference, MPA 2023, 2023 | | 2023 |
A Novel Computational Approach to Predict Metabolites Associated with Somatic Mutations in Cancers SM LEE, LEE GaRyoung, LEE Sungyoung, S Hyojin, YUN Hongseok, ... 한국생물공학회 학술대회, 473-473, 2022 | | 2022 |
Systematic Evaluation of Extraction and Simulation Methods for Development of High-Quality Cancer Patient-Specific Metabolic Models SM LEE, LEE GaRyoung, HU KIM 한국생물공학회 학술대회, 474-474, 2022 | | 2022 |
A computational model of cellular metabolism with mutation data predicts metabolites associated with somatic mutations in cancers SM Lee, GR Lee, S Lee, H Song, SS Yoon, H Yun, Y Koh, HU Kim Cancer Research 82 (12_Supplement), 2733-2733, 2022 | | 2022 |
Systematic Characterization of Metabolic Reprogramming in Cancers Using Genome-scale Metabolic Models LEE GaRyoung, SM LEE, HU KIM 한국생물공학회 학술대회, 142-142, 2021 | | 2021 |
Predicting the effects of small molecules on transcriptome of cancer cell lines using deep learning J Jeon, SM Lee, GR Lee, HU Kim Cancer Research 80 (16_Supplement), 3380-3380, 2020 | | 2020 |
Benchmarking Studies for Template-Based Modeling of Protein Structures SM LEE, WD JANG, HU Kim, SY Lee 한국생물공학회 학술대회, 113-113, 2019 | | 2019 |