Estimating clinical severity of COVID-19 from the transmission dynamics in Wuhan, China JT Wu, K Leung, M Bushman, N Kishore, R Niehus, PM de Salazar, ... Nature medicine 26 (4), 506-510, 2020 | 1681 | 2020 |
Practical considerations for measuring the effective reproductive number, Rt KM Gostic, L McGough, EB Baskerville, S Abbott, K Joshi, C Tedijanto, ... PLoS computational biology 16 (12), e1008409, 2020 | 516 | 2020 |
The gut microbiota is associated with immune cell dynamics in humans J Schluter, JU Peled, BP Taylor, KA Markey, M Smith, Y Taur, R Niehus, ... Nature 588 (7837), 303-307, 2020 | 418 | 2020 |
Evolutionary limits to cooperation in microbial communities NM Oliveira, R Niehus, KR Foster Proceedings of the National Academy of Sciences 111 (50), 17941-17946, 2014 | 225 | 2014 |
The evolution of siderophore production as a competitive trait R Niehus, A Picot, NM Oliveira, S Mitri, KR Foster Evolution 71 (6), 1443-1455, 2017 | 175 | 2017 |
Migration and horizontal gene transfer divide microbial genomes into multiple niches R Niehus, S Mitri, AG Fletcher, KR Foster Nature communications 6 (1), 8924, 2015 | 144 | 2015 |
How to detect and reduce potential sources of biases in studies of SARS-CoV-2 and COVID-19 EK Accorsi, X Qiu, E Rumpler, L Kennedy-Shaffer, R Kahn, K Joshi, ... European journal of epidemiology 36, 179-196, 2021 | 129 | 2021 |
Quantifying bias of COVID-19 prevalence and severity estimates in Wuhan, China that depend on reported cases in international travelers R Niehus, PM De Salazar, AR Taylor, M Lipsitch Medrxiv, 2020 | 116 | 2020 |
The impact of sequencing depth on the inferred taxonomic composition and AMR gene content of metagenomic samples HS Gweon, LP Shaw, J Swann, N De Maio, M AbuOun, R Niehus, ... Environmental Microbiome 14 (1), 1-15, 2019 | 95 | 2019 |
Using predicted imports of 2019-nCoV cases to determine locations that may not be identifying all imported cases PM De Salazar, R Niehus, A Taylor, C Buckee, M Lipsitch MedRxiv, 2020 | 89 | 2020 |
Using observational data to quantify bias of traveller-derived COVID-19 prevalence estimates in Wuhan, China R Niehus, PM De Salazar, AR Taylor, M Lipsitch The Lancet Infectious Diseases 20 (7), 803-808, 2020 | 85 | 2020 |
Identifying locations with possible undetected imported severe acute respiratory syndrome coronavirus 2 cases by using importation predictions PM De Salazar, R Niehus, A Taylor, COF Buckee, M Lipsitch Emerging infectious diseases 26 (7), 1465, 2020 | 62 | 2020 |
Predictive performance of multi-model ensemble forecasts of COVID-19 across European nations K Sherratt, H Gruson, H Johnson, R Niehus, B Prasse, F Sandmann, ... Elife 12, e81916, 2023 | 58 | 2023 |
The evolution of strategy in bacterial warfare via the regulation of bacteriocins and antibiotics R Niehus, NM Oliveira, A Li, AG Fletcher, KR Foster Elife 10, e69756, 2021 | 54 | 2021 |
Estimating internationally imported cases during the early COVID-19 pandemic TF Menkir, T Chin, JA Hay, ED Surface, PM De Salazar, CO Buckee, ... Nature communications 12 (1), 311, 2021 | 48 | 2021 |
Collaborative hubs: making the most of predictive epidemic modeling NG Reich, J Lessler, S Funk, C Viboud, A Vespignani, RJ Tibshirani, ... American Journal of Public Health 112 (6), 839-842, 2022 | 46 | 2022 |
Quantifying antibiotic impact on within-patient dynamics of extended-spectrum beta-lactamase resistance R Niehus, E van Kleef, Y Mo, A Turlej-Rogacka, C Lammens, Y Carmeli, ... Elife 9, e49206, 2020 | 25 | 2020 |
Implications of reducing antibiotic treatment duration for antimicrobial resistance in hospital settings: A modelling study and meta-analysis Y Mo, M Oonsivilai, C Lim, R Niehus, BS Cooper PLoS Medicine 20 (6), e1004013, 2023 | 22 | 2023 |
The influence of COVID-19 risk perception and vaccination status on the number of social contacts across Europe: insights from the CoMix study J Wambua, N Loedy, CI Jarvis, KLM Wong, C Faes, R Grah, B Prasse, ... BMC Public Health 23 (1), 1350, 2023 | 19 | 2023 |
Population-level faecal metagenomic profiling as a tool to predict antimicrobial resistance in Enterobacterales isolates causing invasive infections: An exploratory study … OT Auguet, R Niehus, HS Gweon, JA Berkley, J Waichungo, T Njim, ... EClinicalMedicine 36, 2021 | 15 | 2021 |