| Development and evaluation of functional gene arrays for detection of selected genes in the environment L Wu, DK Thompson, G Li, RA Hurt, JM Tiedje, J Zhou Applied and environmental microbiology 67 (12), 5780-5790, 2001 | 558 | 2001 |
| Transcriptome dynamics of Deinococcus radiodurans recovering from ionizing radiation Y Liu, J Zhou, MV Omelchenko, AS Beliaev, A Venkateswaran, J Stair, ... Proceedings of the National Academy of Sciences 100 (7), 4191-4196, 2003 | 471 | 2003 |
| Constructing gene co-expression networks and predicting functions of unknown genes by random matrix theory F Luo, Y Yang, J Zhong, H Gao, L Khan, DK Thompson, J Zhou BMC bioinformatics 8, 1-17, 2007 | 303 | 2007 |
| Arguing for experimental “facts” in science: A study of research article results sections in biochemistry DK Thompson Written communication 10 (1), 106-128, 1993 | 292 | 1993 |
| Challenges in applying microarrays to environmental studies J Zhou, DK Thompson Current opinion in Biotechnology 13 (3), 204-207, 2002 | 281 | 2002 |
| Global Transcriptome Analysis of the Heat Shock Response of Shewanella oneidensis H Gao, Y Wang, X Liu, T Yan, L Wu, E Alm, A Arkin, DK Thompson, J Zhou Journal of bacteriology 186 (22), 7796-7803, 2004 | 233 | 2004 |
| Molecular dynamics of the Shewanella oneidensis response to chromate stress SD Brown, MR Thompson, NC VerBerkmoes, K Chourey, M Shah, J Zhou, ... Molecular & Cellular Proteomics 5 (6), 1054-1071, 2006 | 227 | 2006 |
| Transcriptional and Proteomic Analysis of a Ferric Uptake Regulator (Fur) Mutant of Shewanella oneidensis: Possible Involvement of Fur in Energy Metabolism … DK Thompson, AS Beliaev, CS Giometti, SL Tollaksen, T Khare, DP Lies, ... Applied and environmental microbiology 68 (2), 881-892, 2002 | 201 | 2002 |
| Transcriptomic and Proteomic Characterization of the Fur Modulon in the Metal-Reducing Bacterium Shewanella oneidensis XF Wan, NC VerBerkmoes, LA McCue, D Stanek, H Connelly, LJ Hauser, ... Journal of bacteriology 186 (24), 8385-8400, 2004 | 165 | 2004 |
| Development and evaluation of microarray-based whole-genome hybridization for detection of microorganisms within the context of environmental applications L Wu, DK Thompson, X Liu, MW Fields, CE Bagwell, JM Tiedje, J Zhou Environmental science & technology 38 (24), 6775-6782, 2004 | 157 | 2004 |
| Global Molecular and Morphological Effects of 24-Hour Chromium(VI) Exposure on Shewanella oneidensis MR-1 K Chourey, MR Thompson, J Morrell-Falvey, NC VerBerkmoes, SD Brown, ... Applied and Environmental Microbiology 72 (9), 6331-6344, 2006 | 140 | 2006 |
| Global Transcriptome Analysis of the Cold Shock Response of Shewanellaoneidensis MR-1 and Mutational Analysis of Its ClassicalCold ShockProteins H Gao, ZK Yang, L Wu, DK Thompson, J Zhou Journal of Bacteriology 188 (12), 4560-4569, 2006 | 136 | 2006 |
| Gene and Protein Expression Profiles of Shewanella oneidensis during Anaerobic Growth with Different Electron Acceptors AS Beliaev, DK Thompson, T Khare, H Lim, CC Brandt, G Li, AE Murray, ... Omics: a journal of integrative biology 6 (1), 39-60, 2002 | 130 | 2002 |
| Transcriptome Analysis of Shewanella oneidensis MR-1 in Response to Elevated Salt Conditions Y Liu, W Gao, Y Wang, L Wu, X Liu, T Yan, E Alm, A Arkin, DK Thompson, ... Journal of bacteriology 187 (7), 2501-2507, 2005 | 110 | 2005 |
| Microarray Transcription Profiling of a Shewanella oneidensis etrA Mutant AS Beliaev, DK Thompson, MW Fields, L Wu, DP Lies, KH Nealson, ... Journal of Bacteriology 184 (16), 4612-4616, 2002 | 100 | 2002 |
| Transcriptome Profiling of Shewanella oneidensis Gene Expression following Exposure to Acidic and Alkaline pH AB Leaphart, DK Thompson, K Huang, E Alm, XF Wan, A Arkin, SD Brown, ... Journal of Bacteriology 188 (4), 1633-1642, 2006 | 87 | 2006 |
| High-level chromate resistance in Arthrobactersp. strain FB24 requires previously uncharacterized accessory genes KL Henne, CH Nakatsu, DK Thompson, AE Konopka BMC microbiology 9, 1-14, 2009 | 86 | 2009 |
| Proteomics reveals a core molecular response of Pseudomonas putida F1 to acute chromate challenge DK Thompson, K Chourey, GS Wickham, SB Thieman, NC VerBerkmoes, ... BMC genomics 11, 1-16, 2010 | 85 | 2010 |
| Expression and heat‐responsive regulation of a TFIIB homologue from the archaeon Haloferax volcanii DK Thompson, JR Palmer, CJ Daniels Molecular microbiology 33 (5), 1081-1092, 1999 | 79 | 1999 |
| Microbial functional genomics J Zhou, DK Thompson, Y Xu, JM Tiedje Wiley-Liss, 2004 | 77 | 2004 |
