| Sequencing depth and coverage: key considerations in genomic analyses D Sims, I Sudbery, NE Ilott, A Heger, CP Ponting Nature Reviews Genetics 15 (2), 121-132, 2014 | 1792 | 2014 |
| UMI-tools: modeling sequencing errors in Unique Molecular Identifiers to improve quantification accuracy T Smith, A Heger, I Sudbery Genome research 27 (3), 491-499, 2017 | 1657 | 2017 |
| KDM2B links the Polycomb Repressive Complex 1 (PRC1) to recognition of CpG islands AM Farcas, NP Blackledge, I Sudbery, HK Long, JF McGouran, NR Rose, ... elife 1, e00205, 2012 | 509 | 2012 |
| Apoptosis induced by environmental stresses and amphotericin B in Candida albicans AJ Phillips, I Sudbery, M Ramsdale Proceedings of the National Academy of Sciences 100 (24), 14327-14332, 2003 | 468 | 2003 |
| Alevin efficiently estimates accurate gene abundances from dscRNA-seq data A Srivastava, L Malik, T Smith, I Sudbery, R Patro Genome biology 20, 1-16, 2019 | 209 | 2019 |
| Next-generation sequencing of advanced prostate cancer treated with androgen-deprivation therapy P Rajan, IM Sudbery, MEM Villasevil, E Mui, J Fleming, M Davis, I Ahmad, ... European urology 66 (1), 32-39, 2014 | 163 | 2014 |
| The m6A-methylase complex recruits TREX and regulates mRNA export S Lesbirel, N Viphakone, M Parker, J Parker, C Heath, I Sudbery, ... Scientific Reports 8 (1), 13827, 2018 | 125 | 2018 |
| Co-transcriptional loading of RNA export factors shapes the human transcriptome N Viphakone, I Sudbery, L Griffith, CG Heath, D Sims, SA Wilson Molecular Cell 75 (2), 310-323. e8, 2019 | 103 | 2019 |
| High-throughput analysis of candidate imprinted genes and allele-specific gene expression in the human term placenta C Daelemans, ME Ritchie, G Smits, S Abu-Amero, IM Sudbery, MS Forrest, ... BMC genetics 11, 1-20, 2010 | 91 | 2010 |
| CGAT: computational genomics analysis toolkit D Sims, NE Ilott, SN Sansom, IM Sudbery, JS Johnson, KA Fawcett, ... Bioinformatics 30 (9), 1290-1291, 2014 | 79 | 2014 |
| Systematic analysis of off-target effects in an RNAi screen reveals microRNAs affecting sensitivity to TRAIL-induced apoptosis I Sudbery, AJ Enright, AG Fraser, I Dunham BMC genomics 11, 1-12, 2010 | 69 | 2010 |
| Identification of a candidate prognostic gene signature by transcriptome analysis of matched pre-and post-treatment prostatic biopsies from patients with advanced prostate cancer P Rajan, J Stockley, IM Sudbery, JT Fleming, A Hedley, G Kalna, D Sims, ... BMC cancer 14, 1-10, 2014 | 56 | 2014 |
| Next-generation sequencing of vertebrate experimental organisms DJ Turner, TM Keane, I Sudbery, DJ Adams Mammalian genome 20, 327-338, 2009 | 54 | 2009 |
| UCHL3 regulates topoisomerase-induced chromosomal break repair by controlling TDP1 proteostasis C Liao, R Beveridge, JJR Hudson, JD Parker, SC Chiang, S Ray, ... Cell reports 23 (11), 3352-3365, 2018 | 51 | 2018 |
| Deep short-read sequencing of chromosome 17 from the mouse strains A/J and CAST/Ei identifies significant germline variation and candidate genes that regulate liver … I Sudbery, J Stalker, JT Simpson, T Keane, AG Rust, ME Hurles, K Walter, ... Genome Biology 10, 1-19, 2009 | 42 | 2009 |
| Macrophage polarisation associated with atherosclerosis differentially affects their capacity to handle lipids K Baidžajevas, É Hadadi, B Lee, J Lum, F Shihui, I Sudbery, E Kiss-Tóth, ... Atherosclerosis 305, 10-18, 2020 | 34 | 2020 |
| Tribbles-1 expression and its function to control inflammatory cytokines, including interleukin-8 levels are regulated by miRNAs in macrophages and prostate cancer cells C Niespolo, JM Johnston, SR Deshmukh, S Satam, Z Shologu, ... Frontiers in Immunology 11, 574046, 2020 | 33 | 2020 |
| CGAT-core: a python framework for building scalable, reproducible computational biology workflows AP Cribbs, S Luna-Valero, C George, IM Sudbery, AJ Berlanga-Taylor, ... bioRxiv, 581009, 2019 | 33 | 2019 |
| Cell Cycle-Independent Phospho-Regulation of Fkh2 during Hyphal Growth Regulates Candida albicans Pathogenesis JA Greig, IM Sudbery, JP Richardson, JR Naglik, Y Wang, PE Sudbery PLoS pathogens 11 (1), e1004630, 2015 | 29 | 2015 |
| Chromatin-based, in cis and in trans regulatory rewiring underpins distinct oncogenic transcriptomes in multiple myeloma J Alvarez-Benayas, N Trasanidis, A Katsarou, K Ponnusamy, A Chaidos, ... Nature communications 12 (1), 5450, 2021 | 28 | 2021 |
Andreas HegerCGAT / WIMM / University of OxfordEmail verificata su imm.ox.ac.uk