| Template-based protein structure modeling using the RaptorX web server M Källberg, H Wang, S Wang, J Peng, Z Wang, H Lu, J Xu Nature protocols 7 (8), 1511-1522, 2012 | 1934 | 2012 |
| Manta: rapid detection of structural variants and indels for germline and cancer sequencing applications X Chen, O Schulz-Trieglaff, R Shaw, B Barnes, F Schlesinger, M Källberg, ... Bioinformatics 32 (8), 1220-1222, 2016 | 1787 | 2016 |
| Strelka2: fast and accurate calling of germline and somatic variants S Kim, K Scheffler, AL Halpern, MA Bekritsky, E Noh, M Källberg, X Chen, ... Nature methods 15 (8), 591-594, 2018 | 1188 | 2018 |
| A reference data set of 5.4 million phased human variants validated by genetic inheritance from sequencing a three-generation 17-member pedigree MA Eberle, E Fritzilas, P Krusche, M Källberg, BL Moore, MA Bekritsky, ... Genome research 27 (1), 157-164, 2017 | 405 | 2017 |
| Isaac: ultra-fast whole-genome secondary analysis on Illumina sequencing platforms C Raczy, R Petrovski, CT Saunders, I Chorny, S Kruglyak, EH Margulies, ... Bioinformatics 29 (16), 2041-2043, 2013 | 370 | 2013 |
| RaptorX server: a resource for template-based protein structure modeling M Källberg, G Margaryan, S Wang, J Ma, J Xu Protein structure prediction, 17-27, 2014 | 310 | 2014 |
| Fast and accurate genomic analyses using genome graphs G Rakocevic, V Semenyuk, WP Lee, J Spencer, J Browning, IJ Johnson, ... Nature genetics 51 (2), 354-362, 2019 | 214 | 2019 |
| Cholesterol modulates cell signaling and protein networking by specifically interacting with PDZ domain-containing scaffold proteins R Sheng, Y Chen, H Yung Gee, E Stec, HR Melowic, NR Blatner, MP Tun, ... Nature communications 3 (1), 1249, 2012 | 183 | 2012 |
| Molecular Basis of the Potent Membrane-remodeling Activity of the Epsin 1 N-terminal Homology Domain Y Yoon, J Tong, PJ Lee, A Albanese, N Bhardwaj, M Källberg, ... Journal of Biological Chemistry 12 (1), 531, 2009 | 79 | 2009 |
| Genome-wide functional annotation of dual-specificity protein-and lipid-binding modules that regulate protein interactions Y Chen, R Sheng, M Källberg, A Silkov, MP Tun, N Bhardwaj, S Kurilova, ... Molecular cell 46 (2), 226-237, 2012 | 77 | 2012 |
| Mechanical signaling on the single protein level studied using steered molecular dynamics GZ Genchev, M Källberg, G Gürsoy, A Mittal, L Dubey, O Perisic, G Feng, ... Cell biochemistry and biophysics 55, 141-152, 2009 | 40 | 2009 |
| Strelka2: fast and accurate variant calling for clinical sequencing applications S Kim, K Scheffler, AL Halpern, MA Bekritsky, E Noh, M Källberg, X Chen, ... Biorxiv, 192872, 2017 | 33 | 2017 |
| An improved machine learning protocol for the identification of correct Sequest search results M Källberg, H Lu BMC bioinformatics 11, 1-11, 2010 | 10 | 2010 |
| A structure-based protocol for learning the family-specific mechanisms of membrane-binding domains M Källberg, N Bhardwaj, R Langlois, H Lu Bioinformatics 28 (18), i431-i437, 2012 | 4 | 2012 |
| Metador: Online resource and prediction server for membrane targeting peripheral proteins N Bhardwaj, M Källberg, W Cho, H Lu Algorithmic and Artificial Intelligence Methods for Protein Bioinformatics …, 2013 | 1 | 2013 |
| Structural feature extraction protocol for classifying reversible membrane binding protein domains M Kallberg, H Lu 2009 Annual International Conference of the IEEE Engineering in Medicine and …, 2009 | 1 | 2009 |
| Enabling Clinical Variant Classification through Intelligent Autocategorization C Mead, T Mann, M Kaellberg, SS Ajay, E Ramos, JD Mayfield, ... JOURNAL OF MOLECULAR DIAGNOSTICS 15 (6), 856-856, 2013 | | 2013 |
| Computational Investigation of Signaling Regimens using Proteomics Data M Källberg University of Illinois at Chicago, 2012 | | 2012 |
| A reference dataset of 5.4 million human variants validated by genetic inheritance from sequencing a three-generation 17-member pedigree MA Eberle, E Fritzilas, P Krusche, M Källberg, BL Moore, MA Bekritsky, ... | | |
