| MaxBin 2.0: an automated binning algorithm to recover genomes from multiple metagenomic datasets YW Wu, BA Simmons, SW Singer Bioinformatics 32 (4), 605-607, 2016 | 1983 | 2016 |
| Critical assessment of metagenome interpretation—a benchmark of metagenomics software A Sczyrba, P Hofmann, P Belmann, D Koslicki, S Janssen, J Dröge, ... Nature methods 14 (11), 1063-1071, 2017 | 797 | 2017 |
| MaxBin: an automated binning method to recover individual genomes from metagenomes using an expectation-maximization algorithm YW Wu, YH Tang, SG Tringe, BA Simmons, SW Singer Microbiome 2, 1-18, 2014 | 678 | 2014 |
| Hydrogen transfer to carbonyls and imines from a hydroxycyclopentadienyl ruthenium hydride: evidence for concerted hydride and proton transfer CP Casey, SW Singer, DR Powell, RK Hayashi, M Kavana Journal of the American Chemical Society 123 (6), 1090-1100, 2001 | 490 | 2001 |
| EMIRGE: reconstruction of full-length ribosomal genes from microbial community short read sequencing data CS Miller, BJ Baker, BC Thomas, SW Singer, JF Banfield Genome biology 12, 1-14, 2011 | 390 | 2011 |
| Machine learning for metabolic engineering: A review CE Lawson, JM Martí, T Radivojevic, SVR Jonnalagadda, R Gentz, ... Metabolic Engineering 63, 34-60, 2021 | 221 | 2021 |
| Community genomic and proteomic analyses of chemoautotrophic iron-oxidizing “Leptospirillum rubarum”(Group II) and “Leptospirillum ferrodiazotrophum”(Group III) bacteria in … DSA Goltsman, VJ Denef, SW Singer, NC VerBerkmoes, M Lefsrud, ... Applied and environmental microbiology 75 (13), 4599-4615, 2009 | 220 | 2009 |
| Extraordinary phylogenetic diversity and metabolic versatility in aquifer sediment CJ Castelle, LA Hug, KC Wrighton, BC Thomas, KH Williams, D Wu, ... Nature communications 4 (1), 2120, 2013 | 219 | 2013 |
| Microbial production of advanced biofuels J Keasling, H Garcia Martin, TS Lee, A Mukhopadhyay, SW Singer, ... Nature Reviews Microbiology 19 (11), 701-715, 2021 | 217 | 2021 |
| Comparative genomics and transcriptomics depict ericoid mycorrhizal fungi as versatile saprotrophs and plant mutualists E Martino, E Morin, GA Grelet, A Kuo, A Kohler, S Daghino, KW Barry, ... New Phytologist 217 (3), 1213-1229, 2018 | 213 | 2018 |
| One-pot ionic liquid pretreatment and saccharification of switchgrass J Shi, JM Gladden, N Sathitsuksanoh, P Kambam, L Sandoval, D Mitra, ... Green Chemistry 15 (9), 2579-2589, 2013 | 210 | 2013 |
| Hydrogen elimination from a hydroxycyclopentadienyl ruthenium (II) hydride: Study of hydrogen activation in a ligand− metal bifunctional hydrogenation catalyst CP Casey, JB Johnson, SW Singer, Q Cui Journal of the American Chemical Society 127 (9), 3100-3109, 2005 | 189 | 2005 |
| Rhodosporidium toruloides: a new platform organism for conversion of lignocellulose into terpene biofuels and bioproducts J Yaegashi, J Kirby, M Ito, J Sun, T Dutta, M Mirsiaghi, ER Sundstrom, ... Biotechnology for biofuels 10, 1-13, 2017 | 176 | 2017 |
| Engineering of Ralstonia eutropha H16 for autotrophic and heterotrophic production of methyl ketones J Mueller, D MacEachran, H Burd, N Sathitsuksanoh, C Bi, YC Yeh, ... Applied and environmental microbiology 79 (14), 4433-4439, 2013 | 176 | 2013 |
| Expansion of the global RNA virome reveals diverse clades of bacteriophages U Neri, YI Wolf, S Roux, AP Camargo, B Lee, D Kazlauskas, IM Chen, ... Cell 185 (21), 4023-4037. e18, 2022 | 158 | 2022 |
| A thermophilic ionic liquid-tolerant cellulase cocktail for the production of cellulosic biofuels JI Park, EJ Steen, H Burd, SS Evans, AM Redding-Johnson, T Batth, ... PloS one 7 (5), e37010, 2012 | 147 | 2012 |
| Development of a broad-host synthetic biology toolbox for Ralstonia eutropha and its application to engineering hydrocarbon biofuel production C Bi, P Su, J Müller, YC Yeh, SR Chhabra, HR Beller, SW Singer, ... Microbial cell factories 12, 1-10, 2013 | 146 | 2013 |
| Glycoside hydrolase activities of thermophilic bacterial consortia adapted to switchgrass JM Gladden, M Allgaier, CS Miller, TC Hazen, JS VanderGheynst, ... Applied and environmental microbiology 77 (16), 5804-5812, 2011 | 129 | 2011 |
| Strategies for enhancing the effectiveness of metagenomic-based enzyme discovery in lignocellulolytic microbial communities KM DeAngelis, JM Gladden, M Allgaier, P D’haeseleer, JL Fortney, ... Bioenergy Research 3, 146-158, 2010 | 121 | 2010 |
| Approaches for more efficient biological conversion of lignocellulosic feedstocks to biofuels and bioproducts NR Baral, ER Sundstrom, L Das, J Gladden, A Eudes, JC Mortimer, ... ACS sustainable chemistry & engineering 7 (10), 9062-9079, 2019 | 116 | 2019 |
Blake A. SimmonsLawrence Berkeley National LaboratoryEmail verificata su lbl.gov