Timothy G Vaughan

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Alexei J. DrummondProfessor of Computational Biology, University of AucklandEmail verificata su cs.auckland.ac.nz
Tanja StadlerETH ZurichEmail verificata su env.ethz.ch
Denise KühnertRobert Koch Institut & Max Planck Institute of GeoanthropologyEmail verificata su shh.mpg.de
Joëlle Barido-SottaniIBENS, CNRS, ENS PSLEmail verificata su bio.ens.psl.eu
Joseph HeledAuckland UniversityEmail verificata su cs.auckland.ac.nz
Remco BouckaertEmail verificata su cs.auckland.ac.nz
David A RasmussenNorth Carolina State UniversityEmail verificata su ncsu.edu
Andrew RambautProfessor of Molecular Evolution, University of EdinburghEmail verificata su ed.ac.uk
Dong XieDepartment of Computer Science, University of AucklandEmail verificata su cs.auckland.ac.nz
Marc A. SuchardProfessor, University of California, Los AngelesEmail verificata su ucla.edu
Chieh-Hsi WuLecturer in Statistics, University of SouthamptonEmail verificata su soton.ac.uk
Sebastian DucheneInstitut Pasteur, Paris, FranceEmail verificata su pasteur.fr
Nicola Felix MüllerUniviersity of California San FranciscoEmail verificata su ucsf.edu
Louis du PlessisUniversity of OxfordEmail verificata su zoo.ox.ac.uk
Peter D. DrummondProfessor of Theoretical Physics, Swinburne University of TechnologyEmail verificata su swin.edu.au
Huw Alexander OgilvieMD Anderson Cancer CenterEmail verificata su mdanderson.org
Chi ZhangInstitute of Vertebrate Paleontology and Paleoanthropology, Chinese Academy of SciencesEmail verificata su ivpp.ac.cn
Fábio Kuriki MendesAssistant Professor, Louisiana State UniversityEmail verificata su lsu.edu
Alexandra "Sasha" GavryushkinaResearch fellow at Canterbury UniversityEmail verificata su canterbury.ac.nz
Sarah NadeauPhD Student, ETH ZurichEmail verificata su bsse.ethz.ch

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Timothy G Vaughan

Department of Biosystems Science and Engineering, ETH Zürich, Switzerland

Email verificata su bsse.ethz.ch

Phylogenetics Phylodynamics Bayesian Statistics Computational Biology


Titolo Ordina per citazioni Ordina per anno Ordina per titolo	Citata da Citata da	Anno
BEAST 2: a software platform for Bayesian evolutionary analysis R Bouckaert, J Heled, D Kühnert, T Vaughan, CH Wu, D Xie, MA Suchard, ... PLoS computational biology 10 (4), e1003537, 2014	6596	2014
BEAST 2.5: An advanced software platform for Bayesian evolutionary analysis R Bouckaert, TG Vaughan, J Barido-Sottani, S Duchêne, M Fourment, ... PLoS computational biology 15 (4), e1006650, 2019	3346	2019
Spread of a SARS-CoV-2 variant through Europe in the summer of 2020 EB Hodcroft, M Zuber, S Nadeau, TG Vaughan, KHD Crawford, ... Nature 595 (7869), 707-712, 2021	616	2021
Phylodynamics with migration: a computational framework to quantify population structure from genomic data D Kühnert, T Stadler, TG Vaughan, AJ Drummond Molecular biology and evolution 33 (8), 2102-2116, 2016	164	2016
Genomic sequencing of SARS-CoV-2: a guide to implementation for maximum impact on public health, 8 January 2021 World Health Organization World Health Organization, 2021	163	2021
Efficient Bayesian inference under the structured coalescent TG Vaughan, D Kühnert, A Popinga, D Welch, AJ Drummond Bioinformatics 30 (16), 2272-2279, 2014	151	2014
Simultaneous reconstruction of evolutionary history and epidemiological dynamics from viral sequences with the birth–death SIR model D Kühnert, T Stadler, TG Vaughan, AJ Drummond Journal of the Royal Society Interface 11 (94), 20131106, 2014	141	2014
IcyTree: rapid browser-based visualization for phylogenetic trees and networks TG Vaughan Bioinformatics 33 (15), 2392-2394, 2017	122	2017
Taming the BEAST—A community teaching material resource for BEAST 2 J Barido-Sottani, V Bošková, LD Plessis, D Kühnert, C Magnus, V Mitov, ... Systematic biology 67 (1), 170-174, 2018	118	2018
A Bayesian model predicts the response of axons to molecular gradients D Mortimer, J Feldner, T Vaughan, I Vetter, Z Pujic, WJ Rosoff, K Burrage, ... Proceedings of the National Academy of Sciences 106 (25), 10296-10301, 2009	117	2009
The origin and early spread of SARS-CoV-2 in Europe SA Nadeau, TG Vaughan, J Scire, JS Huisman, T Stadler Proceedings of the National Academy of Sciences 118 (9), e2012008118, 2021	110	2021
Einstein-Podolsky-Rosen entanglement strategies in two-well Bose-Einstein condensates QY He, MD Reid, TG Vaughan, C Gross, M Oberthaler, PD Drummond Physical review letters 106 (12), 120405, 2011	106	2011
Axon guidance by growth-rate modulation D Mortimer, Z Pujic, T Vaughan, AW Thompson, J Feldner, I Vetter, ... Proceedings of the National Academy of Sciences 107 (11), 5202-5207, 2010	82	2010
Reproductive number of the COVID-19 epidemic in Switzerland with a focus on the Cantons of Basel-Stadt and Basel-Landschaft J Scire, SA Nadeau, TG Vaughan, B Gavin, S Fuchs, J Sommer, KN Koch, ... Swiss medical weekly 150 (19-20), w20271, 2020	79	2020
A stochastic simulator of birth–death master equations with application to phylodynamics TG Vaughan, AJ Drummond Molecular biology and evolution 30 (6), 1480-1493, 2013	75	2013
A multitype birth–death model for Bayesian inference of lineage-specific birth and death rates J Barido-Sottani, TG Vaughan, T Stadler Systematic biology 69 (5), 973-986, 2020	63	2020
Estimating epidemic incidence and prevalence from genomic data TG Vaughan, GE Leventhal, DA Rasmussen, AJ Drummond, D Welch, ... Molecular Biology and Evolution, msz106, 2019	55	2019
Inferring ancestral recombination graphs from bacterial genomic data TG Vaughan, D Welch, AJ Drummond, PJ Biggs, T George, NP French Genetics 205 (2), 857-870, 2017	53	2017
Genetic diversity loss in a biodiversity hotspot: ancient DNA quantifies genetic decline and former connectivity in a critically endangered marsupial C Pacioni, H Hunt, ME Allentoft, TG Vaughan, AF Wayne, A Baynes, ... Molecular Ecology 24 (23), 5813-5828, 2015	52	2015
Bayesian inference of reassortment networks reveals fitness benefits of reassortment in human influenza viruses NF Müller, U Stolz, G Dudas, T Stadler, TG Vaughan Proceedings of the National Academy of Sciences 117 (29), 17104-17111, 2020	51	2020

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