| Modeling epigenome folding: formation and dynamics of topologically associated chromatin domains D Jost, P Carrivain, G Cavalli, C Vaillant Nucleic acids research 42 (15), 9553-9561, 2014 | 428 | 2014 |
| TADs are 3D structural units of higher-order chromosome organization in Drosophila Q Szabo, D Jost, JM Chang, DI Cattoni, GL Papadopoulos, B Bonev, ... Science Advances 4 (2), eaar8082, 2018 | 268 | 2018 |
| 4D genome rewiring during oncogene-induced and replicative senescence S Sati, B Bonev, Q Szabo, D Jost, P Bensadoun, F Serra, V Loubiere, ... Molecular cell 78 (3), 522-538. e9, 2020 | 147 | 2020 |
| How epigenome drives chromatin folding and dynamics, insights from efficient coarse-grained models of chromosomes SK Ghosh, D Jost PLOS Computational Biology 14 (5), e1006159, 2018 | 88 | 2018 |
| IC-Finder: inferring robustly the hierarchical organization of chromatin folding N Haddad, C Vaillant, D Jost Nucleic acids research 45 (10), e81-e81, 2017 | 81 | 2017 |
| Perspectives: using polymer modeling to understand the formation and function of nuclear compartments N Haddad, D Jost, C Vaillant Chromosome Research 25, 35-50, 2017 | 79 | 2017 |
| Epigenomics in 3D: importance of long-range spreading and specific interactions in epigenomic maintenance D Jost, C Vaillant Nucleic acids research 46 (5), 2252-2264, 2018 | 74 | 2018 |
| Differential spatial and structural organization of the X chromosome underlies dosage compensation in C. elegans R Sharma, D Jost, J Kind, G Gómez-Saldivar, B van Steensel, P Askjaer, ... Genes & development 28 (23), 2591-2596, 2014 | 60 | 2014 |
| Rouse model with transient intramolecular contacts on a timescale of seconds recapitulates folding and fluctuation of yeast chromosomes M Socol, R Wang, D Jost, P Carrivain, C Vaillant, E Le Cam, V Dahirel, ... Nucleic acids research 47 (12), 6195-6207, 2019 | 54 | 2019 |
| A Unified Poland-Scheraga Model of Oligo-and Polynucleotide DNA Melting: Salt Effects and Predictive Power D Jost, R Everaers Biophysical journal 96 (3), 1056-1067, 2009 | 54 | 2009 |
| Coupling 1D modifications and 3D nuclear organization: data, models and function D Jost, C Vaillant, P Meister Current Opinion in Cell Biology 44, 20-27, 2017 | 52 | 2017 |
| Bifurcation in epigenetics: Implications in development, proliferation, and diseases D Jost Physical Review E 89 (1), 010701, 2014 | 49 | 2014 |
| Chromosome dynamics during interphase: a biophysical perspective MMC Tortora, H Salari, D Jost Current Opinion in Genetics & Development 61, 37-43, 2020 | 47 | 2020 |
| Guidelines for cell-type heterogeneity quantification based on a comparative analysis of reference-free DNA methylation deconvolution software C Decamps, F Privé, R Bacher, D Jost, A Waguet, EA Houseman, E Lurie, ... BMC bioinformatics 21, 1-15, 2020 | 43 | 2020 |
| Small RNA biology is systems biology D Jost, A Nowojewski, E Levine BMB reports 44 (1), 11-21, 2011 | 43 | 2011 |
| Temperature Dependence of the DNA Double Helix at the Nanoscale: Structure, Elasticity, and Fluctuations S Meyer, D Jost, N Theodorakopoulos, M Peyrard, R Lavery, R Everaers Biophysical Journal 105 (8), 1904-1914, 2013 | 42 | 2013 |
| 4D nucleome modeling M Di Stefano, J Paulsen, D Jost, MA Marti-Renom Current Opinion in Genetics & Development 67, 25-32, 2021 | 39 | 2021 |
| The folding landscape of the epigenome JD Olarte-Plata, N Haddad, C Vaillant, D Jost Physical Biology 13 (2), 026001, 2016 | 38 | 2016 |
| Spatial organization of chromosomes leads to heterogeneous chromatin motion and drives the liquid-or gel-like dynamical behavior of chromatin H Salari, M Di Stefano, D Jost Genome Research 32 (1), 28-43, 2022 | 33 | 2022 |
| Polymer modelling unveils the roles of heterochromatin and nucleolar organizing regions in shaping 3D genome organization in Arabidopsis thaliana M Di Stefano, HW Nützmann, MA Marti-Renom, D Jost Nucleic Acids Research 49 (4), 1840-1858, 2021 | 33 | 2021 |
Giacomo CavalliInstitute of Human Genetics (IGH), Montpellier, FranceEmail verificata su igh.cnrs.fr