| High-definition spatial transcriptomics for in situ tissue profiling S Vickovic, G Eraslan, F Salmén, J Klughammer, L Stenbeck, D Schapiro, ... Nature methods 16 (10), 987-990, 2019 | 957 | 2019 |
| The Transcription Factor NFAT Promotes Exhaustion of Activated CD8+ T Cells GJ Martinez, RM Pereira, T Äijö, EY Kim, F Marangoni, ME Pipkin, ... Immunity 42 (2), 265-278, 2015 | 773 | 2015 |
| Modulation of TET2 expression and 5-methylcytosine oxidation by the CXXC domain protein IDAX M Ko, J An, HS Bandukwala, L Chavez, T Äijö, WA Pastor, MF Segal, H Li, ... Nature 497 (7447), 122-126, 2013 | 451 | 2013 |
| Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis S Maniatis, T Äijö, S Vickovic, C Braine, K Kang, A Mollbrink, ... Science 364 (6435), 89-93, 2019 | 392 | 2019 |
| Control of Foxp3 stability through modulation of TET activity X Yue, S Trifari, T Äijö, A Tsagaratou, WA Pastor, JA Zepeda-Martínez, ... Journal of Experimental Medicine 213 (3), 377-397, 2016 | 329 | 2016 |
| Migratory DCs activate TGF-β to precondition naïve CD8+ T cells for tissue-resident memory fate V Mani, SK Bromley, T Äijö, R Mora-Buch, E Carrizosa, RD Warner, ... Science 366 (6462), eaav5728, 2019 | 182 | 2019 |
| Dissecting the dynamic changes of 5-hydroxymethylcytosine in T-cell development and differentiation A Tsagaratou, T Äijö, CWJ Lio, X Yue, Y Huang, SE Jacobsen, ... Proceedings of the National Academy of Sciences 111 (32), E3306-E3315, 2014 | 175 | 2014 |
| Learning gene regulatory networks from gene expression measurements using non-parametric molecular kinetics T Äijö, H Lähdesmäki Bioinformatics 25 (22), 2937-2944, 2009 | 127 | 2009 |
| Genome-wide Analysis of STAT3-Mediated Transcription during Early Human Th17 Cell Differentiation SK Tripathi, Z Chen, A Larjo, K Kanduri, K Nousiainen, T Äijo, ... Cell Reports 19 (9), 1888-1901, 2017 | 121 | 2017 |
| Evaluation of methods for detection of fluorescence labeled subcellular objects in microscope images P Ruusuvuori, T Äijö, S Chowdhury, C Garmendia-Torres, J Selinummi, ... BMC bioinformatics 11 (1), 248, 2010 | 114 | 2010 |
| MicroRNA-directed program of cytotoxic CD8+ T-cell differentiation S Trifari, ME Pipkin, HS Bandukwala, T Äijö, J Bassein, R Chen, ... Proceedings of the National Academy of Sciences 110 (46), 18608-18613, 2013 | 108 | 2013 |
| Methods for time series analysis of RNA-seq data with application to human Th17 cell differentiation T Äijö, V Butty, Z Chen, V Salo, S Tripathi, CB Burge, R Lahesmaa, ... Bioinformatics 30 (12), i113-i120, 2014 | 88 | 2014 |
| Identification of early gene expression changes during human Th17 cell differentiation S Tuomela, V Salo, SK Tripathi, Z Chen, K Laurila, B Gupta, T Äijö, ... Blood 119 (23), e151-e160, 2012 | 85 | 2012 |
| The microRNA miR-31 inhibits CD8+ T cell function in chronic viral infection HF Moffett, ANR Cartwright, HJ Kim, J Godec, J Pyrdol, T Äijö, GJ Martinez, ... Nature Immunology 18 (7), 791-799, 2017 | 83 | 2017 |
| Temporal probabilistic modeling of bacterial compositions derived from 16S rRNA sequencing T Äijö, CL Müller, R Bonneau Bioinformatics 34 (3), 372-380, 2018 | 74 | 2018 |
| Comparative analysis of human and mouse transcriptomes of Th17 cell priming. S Tuomela, S Rautio, H Ahlfors, V Öling, V Salo, U Ullah, Z Chen, ... Oncotarget 7 (12), 13416-13428, 2016 | 61 | 2016 |
| An integrative computational systems biology approach identifies differentially regulated dynamic transcriptome signatures which drive the initiation of human T helper cell … T Äijö, SM Edelman, T Lönnberg, A Larjo, H Kallionpää, S Tuomela, ... BMC genomics 13 (1), 572, 2012 | 46 | 2012 |
| Heterogeneous nuclear ribonucleoprotein L-like (hnRNPLL) and elongation factor, RNA polymerase II, 2 (ELL2) are regulators of mRNA processing in plasma cells MJ Benson, T Äijö, X Chang, J Gagnon, UJ Pape, V Anantharaman, ... Proceedings of the National Academy of Sciences 109 (40), 16252-16257, 2012 | 45 | 2012 |
| Biophysically motivated regulatory network inference: progress and prospects T Äijö, R Bonneau Human heredity 81 (2), 62-77, 2017 | 33* | 2017 |
| Tumor Tolerance–Promoting Function of Regulatory T Cells Is Optimized by CD28, but Strictly Dependent on Calcineurin F Marangoni, R Zhang, V Mani, M Thelen, NJA Akbar, RD Warner, T Äijö, ... The Journal of Immunology 200 (10), 3647-3661, 2018 | 23 | 2018 |