| Transcription factors as readers and effectors of DNA methylation H Zhu, G Wang, J Qian Nature Reviews Genetics 17 (9), 551-565, 2016 | 639 | 2016 |
| Integrated proteogenomic characterization of clear cell renal cell carcinoma DJ Clark, SM Dhanasekaran, F Petralia, J Pan, X Song, Y Hu, ... Cell 179 (4), 964-983. e31, 2019 | 566 | 2019 |
| Profiling the human protein-DNA interactome reveals ERK2 as a transcriptional repressor of interferon signaling S Hu, Z Xie, A Onishi, X Yu, L Jiang, J Lin, H Rho, C Woodard, H Wang, ... Cell 139 (3), 610-622, 2009 | 458 | 2009 |
| TiGER: a database for tissue-specific gene expression and regulation X Liu, X Yu, DJ Zack, H Zhu, J Qian BMC bioinformatics 9, 1-7, 2008 | 458 | 2008 |
| A genomic atlas of mouse hypothalamic development T Shimogori, DA Lee, A Miranda-Angulo, Y Yang, H Wang, L Jiang, ... Nature neuroscience 13 (6), 767-775, 2010 | 408 | 2010 |
| DNA methylation presents distinct binding sites for human transcription factors S Hu, J Wan, Y Su, Q Song, Y Zeng, HN Nguyen, J Shin, E Cox, HS Rho, ... elife 2, e00726, 2013 | 383 | 2013 |
| A nuclease that mediates cell death induced by DNA damage and poly (ADP-ribose) polymerase-1 Y Wang, R An, GK Umanah, H Park, K Nambiar, SM Eacker, BW Kim, ... Science 354 (6308), aad6872, 2016 | 353 | 2016 |
| Complex transcriptional circuitry at the G1/S transition in Saccharomyces cerevisiae CE Horak, NM Luscombe, J Qian, P Bertone, S Piccirrillo, M Gerstein, ... Genes & development 16 (23), 3017-3033, 2002 | 350 | 2002 |
| Protein acetylation microarray reveals that NuA4 controls key metabolic target regulating gluconeogenesis Y Lin, J Lu, J Zhang, W Walter, W Dang, J Wan, SC Tao, J Qian, Y Zhao, ... Cell 136 (6), 1073-1084, 2009 | 346 | 2009 |
| Gene regulatory networks controlling vertebrate retinal regeneration T Hoang, J Wang, P Boyd, F Wang, C Santiago, L Jiang, S Yoo, M Lahne, ... Science 370 (6519), eabb8598, 2020 | 340 | 2020 |
| Genomic analysis of gene expression relationships in transcriptional regulatory networks H Yu, NM Luscombe, J Qian, M Gerstein TRENDS in Genetics 19 (8), 422-427, 2003 | 337 | 2003 |
| Protein family and fold occurrence in genomes: power-law behaviour and evolutionary model J Qian, NM Luscombe, M Gerstein Journal of molecular biology 313 (4), 673-681, 2001 | 328 | 2001 |
| EnhancerAtlas 2.0: an updated resource with enhancer annotation in 586 tissue/cell types across nine species T Gao, J Qian Nucleic acids research 48 (D1), D58-D64, 2020 | 308 | 2020 |
| Overview of protein microarrays FXR Sutandy, J Qian, CS Chen, H Zhu Current protocols in protein science 72 (1), 27.1. 1-27.1. 16, 2013 | 276 | 2013 |
| Interrelating different types of genomic data, from proteome to secretome:'oming in on function D Greenbaum, NM Luscombe, R Jansen, J Qian, M Gerstein Genome research 11 (9), 1463-1468, 2001 | 266 | 2001 |
| Proteogenomic insights into the biology and treatment of HPV-negative head and neck squamous cell carcinoma C Huang, L Chen, SR Savage, RV Eguez, Y Dou, Y Li, ... Cancer cell 39 (3), 361-379. e16, 2021 | 253 | 2021 |
| Beyond synexpression relationships: local clustering of time-shifted and inverted gene expression profiles identifies new, biologically relevant interactions J Qian, M Dolled-Filhart, J Lin, H Yu, M Gerstein Journal of molecular biology 314 (5), 1053-1066, 2001 | 240 | 2001 |
| Lectin microarrays identify cell-specific and functionally significant cell surface glycan markers SC Tao, Y Li, J Zhou, J Qian, RL Schnaar, Y Zhang, IJ Goldstein, H Zhu, ... Glycobiology 18 (10), 761-769, 2008 | 208 | 2008 |
| Zika-virus-encoded NS2A disrupts mammalian cortical neurogenesis by degrading adherens junction proteins KJ Yoon, G Song, X Qian, J Pan, D Xu, HS Rho, NS Kim, C Habela, ... Cell stem cell 21 (3), 349-358. e6, 2017 | 205 | 2017 |
| Prediction of regulatory networks: genome-wide identification of transcription factor targets from gene expression data J Qian, J Lin, NM Luscombe, H Yu, M Gerstein Bioinformatics 19 (15), 1917-1926, 2003 | 196 | 2003 |
Heng ZhuJohns Hopkins University School of MedicineEmail verificata su jhmi.edu