A data-driven hydrophobicity scale for predicting liquid–liquid phase separation of proteins T Dannenhoffer-Lafage, RB Best The Journal of Physical Chemistry B 125 (16), 4046-4056, 2021 | 80 | 2021 |
Extending the range and physical accuracy of coarse-grained models: Order parameter dependent interactions JW Wagner, T Dannenhoffer-Lafage, J Jin, GA Voth The Journal of chemical physics 147 (4), 2017 | 70 | 2017 |
A direct method for incorporating experimental data into multiscale coarse-grained models T Dannenhoffer-Lafage, AD White, GA Voth Journal of chemical theory and computation 12 (5), 2144-2153, 2016 | 37 | 2016 |
Systematic coarse-grained lipid force fields with semiexplicit solvation via virtual sites AJ Pak, T Dannenhoffer-Lafage, JJ Madsen, GA Voth Journal of Chemical Theory and Computation 15 (3), 2087-2100, 2019 | 36 | 2019 |
Compatible observable decompositions for coarse-grained representations of real molecular systems T Dannenhoffer-Lafage, JW Wagner, AEP Durumeric, GA Voth The Journal of chemical physics 151 (13), 2019 | 22 | 2019 |
Multiconfigurational coarse-grained molecular dynamics ME Sharp, FX Vázquez, JW Wagner, T Dannenhoffer-Lafage, GA Voth Journal of chemical theory and computation 15 (5), 3306-3315, 2019 | 22 | 2019 |
Coarse-grained directed simulation GM Hocky, T Dannenhoffer-Lafage, GA Voth Journal of chemical theory and computation 13 (9), 4593-4603, 2017 | 14 | 2017 |
Reactive coarse-grained molecular dynamics T Dannenhoffer-Lafage, GA Voth Journal of Chemical Theory and Computation 16 (4), 2541-2549, 2020 | 13 | 2020 |
Identifying Sequence Effects on Chain Dimensions of Disordered Proteins by Integrating Experiments and Simulations A Holla, EW Martin, T Dannenhoffer-Lafage, KM Ruff, SLB König, ... JACS Au, 2024 | | 2024 |
Coarse-grained intrinsically disordered protein simulations with explicit ions parameterized by salting-out constants TP Dannenhoffer-Lafage, RB Best Biophysical Journal 122 (3), 59a, 2023 | | 2023 |
Coarse-grained molecular dynamics study of fibril formation occurring in the low complexity domain of Fused in Sarcoma within a liquid droplet environment TP Dannenhoffer-Lafage, RB Best Biophysical Journal 121 (3), 444a, 2022 | | 2022 |
Bottom-Up Coarse-Grained Models for Intrinsically Disordered Proteins TP Dannenhoffer-Lafage, RB Best Biophysical Journal 120 (3), 29a, 2021 | | 2021 |
Explicit Ions for Coarse-Grained Simulations of Intrinsically Disordered Proteins via Hydrophobicity/Hydrophilicity Scales TP Dannenhoffer-Lafage, RB Best Biophysical Journal 118 (3), 142a, 2020 | | 2020 |
Simulation of Hofmeister effects in intrinsically disordered proteins via explicit ion coarse-grained simulations utilizing hydrophobicity scale interactions T Dannenhoffer-Lafage, R Best ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY 258, 2019 | | 2019 |
A Hybrid Approach Toward Systematically-Derived Implicit-Solvent Coarse-Grained Lipid Models AJ Pak, T Dannenhoffer-Lafage, JJ Madsen, GA Voth 2018 AIChE Annual Meeting, 2018 | | 2018 |
Basis Sets and Optimization for Coarse-grained Models T Dannenhoffer-Lafage The University of Chicago, 2018 | | 2018 |
Coarse-grained directed simulations via adaptive linear biases G Hocky, T Dannenhoffer-Lafage, G Voth ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY 254, 2017 | | 2017 |