SqueezeMeta, A Highly Portable, Fully Automatic Metagenomic Analysis Pipeline J Tamames, F Puente-Sánchez Frontiers in microbiology 9, 3349, 2019 | 346* | 2019 |
Microdiversity ensures the maintenance of functional microbial communities under changing environmental conditions N García-García, J Tamames, AM Linz, C Pedrós-Alió, F Puente-Sánchez The ISME journal 13 (12), 2969-2983, 2019 | 155 | 2019 |
Viable cyanobacteria in the deep continental subsurface F Puente-Sánchez, A Arce-Rodríguez, M Oggerin, M García-Villadangos, ... Proceedings of the National Academy of Sciences 115 (42), 10702-10707, 2018 | 133 | 2018 |
Mycobiome profiles in breast milk from healthy women depend on mode of delivery, geographic location, and interaction with bacteria A Boix-Amorós, F Puente-Sánchez, E Du Toit, KM Linderborg, Y Zhang, ... Applied and environmental microbiology 85 (9), e02994-18, 2019 | 127 | 2019 |
Assessing the performance of different approaches for functional and taxonomic annotation of metagenomes J Tamames, M Cobo-Simón, F Puente-Sánchez BMC genomics 20, 1-16, 2019 | 81 | 2019 |
Environmental parameters, and not phylogeny, determine the composition of extracellular polymeric substances in microbial mats from extreme environments Y Blanco, LA Rivas, E González-Toril, M Ruiz-Bermejo, M Moreno-Paz, ... Science of the Total Environment 650, 384-393, 2019 | 73 | 2019 |
SQMtools: automated processing and visual analysis of ’omics data with R and anvi’o F Puente-Sánchez, N García-García, J Tamames BMC Bioinformatics 21, 358, 2020 | 64 | 2020 |
Nucleation of Fe-rich phosphates and carbonates on microbial cells and exopolymeric substances M Sanchez-Roman, F Puente-Sanchez, V Parro, R Amils Frontiers in microbiology 6, 1024, 2015 | 58 | 2015 |
A novel conceptual approach to read-filtering in high-throughput amplicon sequencing studies F Puente-Sánchez, J Aguirre, V Parro Nucleic acids research 44 (4), e40-e40, 2016 | 51 | 2016 |
Thermoplasmatales and sulfur-oxidizing bacteria dominate the microbial community at the surface water of a CO2-rich hydrothermal spring located in Tenorio … A Arce-Rodríguez, F Puente-Sánchez, R Avendaño, M Martínez-Cruz, ... Extremophiles 23, 177-187, 2019 | 44 | 2019 |
Basis of genetic adaptation to heavy metal stress in the acidophilic green alga Chlamydomonas acidophila F Puente-Sánchez, S Díaz, V Penacho, A Aguilera, S Olsson Aquatic Toxicology 200, 62-72, 2018 | 43 | 2018 |
Microbiota characterization of sheep milk and its association with somatic cell count using 16s rRNA gene sequencing C Esteban‐Blanco, B Gutiérrez‐Gil, F Puente‐Sánchez, H Marina, ... Journal of Animal Breeding and Genetics 137 (1), 73-83, 2020 | 42 | 2020 |
Impacts of Saharan dust intrusions on bacterial communities of the low troposphere E González-Toril, S Osuna, D Viúdez-Moreiras, I Navarro-Cid, SD Toro, ... Scientific reports 10 (1), 6837, 2020 | 38 | 2020 |
Horizontal gene transfer of phytochelatin synthases from bacteria to extremophilic green algae S Olsson, V Penacho, F Puente-Sánchez, S Díaz, JE Gonzalez-Pastor, ... Microbial ecology 73, 50-60, 2017 | 38 | 2017 |
Deep subsurface sulfate reduction and methanogenesis in the Iberian Pyrite Belt revealed through geochemistry and molecular biomarkers F Puente‐Sánchez, M Moreno‐Paz, LA Rivas, P Cruz‐Gil, ... Geobiology 12 (1), 34-47, 2014 | 36 | 2014 |
Biomarker profiling of microbial mats in the geothermal band of Cerro Caliente, Deception Island (Antarctica): life at the edge of heat and cold MÁ Lezcano, M Moreno-Paz, D Carrizo, O Prieto-Ballesteros, ... Astrobiology 19 (12), 1490-1504, 2019 | 31 | 2019 |
Tessaracoccus lapidicaptus sp. nov., an actinobacterium isolated from the deep subsurface of the Iberian pyrite belt F Puente-Sanchez, M Sanchez-Roman, R Amils, V Parro International journal of systematic and evolutionary microbiology 64 (Pt_10 …, 2014 | 28 | 2014 |
Transcriptional response to copper excess and identification of genes involved in heavy metal tolerance in the extremophilic microalga Chlamydomonas acidophila S Olsson, F Puente-Sanchez, MJ Gómez, A Aguilera Extremophiles 19, 657-672, 2015 | 27 | 2015 |
Fungal and ciliate protozoa are the main rumen microbes associated with methane emissions in dairy cattle A López-García, A Saborío-Montero, M Gutiérrez-Rivas, R Atxaerandio, ... Gigascience 11, giab088, 2022 | 26 | 2022 |
A dimensional reduction approach to modulate the core ruminal microbiome associated with methane emissions via selective breeding A Saborío-Montero, A López-García, M Gutiérrez-Rivas, R Atxaerandio, ... Journal of dairy science 104 (7), 8135-8151, 2021 | 25 | 2021 |