| Evaluating the effects of SARS-CoV-2 spike mutation D614G on transmissibility and pathogenicity E Volz, V Hill, JT McCrone, A Price, D Jorgensen, Á O’Toole, J Southgate, ... Cell 184 (1), 64-75. e11, 2021 | 1137 | 2021 |
| A plasmid DNA-launched SARS-CoV-2 reverse genetics system and coronavirus toolkit for COVID-19 research SJ Rihn, A Merits, S Bakshi, ML Turnbull, A Wickenhagen, AJT Alexander, ... PLoS biology 19 (2), e3001091, 2021 | 196 | 2021 |
| Metabolomics to unveil and understand phenotypic diversity between pathogen populations R t'Kindt, RA Scheltema, A Jankevics, K Brunker, S Rijal, JC Dujardin, ... PLoS neglected tropical diseases 4 (11), e904, 2010 | 123 | 2010 |
| Genomic epidemiology reveals multiple introductions of SARS-CoV-2 from mainland Europe into Scotland A da Silva Filipe, JG Shepherd, T Williams, J Hughes, E Aranday-Cortes, ... Nature Microbiology 6 (1), 112-122, 2021 | 111 | 2021 |
| Molecular Mechanisms of Drug Resistance in Natural Leishmania Populations Vary with Genetic Background S Decuypere, M Vanaerschot, K Brunker, H Imamura, S Müller, B Khanal, ... PLoS neglected tropical diseases 6 (2), e1514, 2012 | 104 | 2012 |
| Rabies virus K Brunker, N Mollentze Trends in microbiology 26 (10), 886-887, 2018 | 97 | 2018 |
| Elucidating the phylodynamics of endemic rabies virus in eastern Africa using whole-genome sequencing K Brunker, DA Marston, DL Horton, S Cleaveland, AR Fooks, R Kazwala, ... Virus Evolution 1 (1), vev011, 2015 | 77 | 2015 |
| Landscape attributes governing local transmission of an endemic zoonosis: Rabies virus in domestic dogs K Brunker, P Lemey, DA Marston, AR Fooks, A Lugelo, C Ngeleja, ... Molecular ecology 27 (3), 773-788, 2018 | 67 | 2018 |
| Rapid in-country sequencing of whole virus genomes to inform rabies elimination programmes K Brunker, G Jaswant, SM Thumbi, K Lushasi, A Lugelo, AM Czupryna, ... Wellcome Open Research 5, 2020 | 55 | 2020 |
| Integrating the landscape epidemiology and genetics of RNA viruses: rabies in domestic dogs as a model K Brunker, K Hampson, DL Horton, R Biek Parasitology 139 (14), 1899-1913, 2012 | 55 | 2012 |
| Rabies shows how scale of transmission can enable acute infections to persist at low prevalence R Mancy, M Rajeev, A Lugelo, K Brunker, S Cleaveland, EA Ferguson, ... Science 376 (6592), 512-516, 2022 | 33 | 2022 |
| Making genomic surveillance deliver: A lineage classification and nomenclature system to inform rabies elimination K Campbell, RJ Gifford, J Singer, V Hill, A O’toole, A Rambaut, ... PLoS Pathogens 18 (5), e1010023, 2022 | 32 | 2022 |
| Surveillance to establish elimination of transmission and freedom from dog-mediated rabies K Hampson, B Abela-Ridder, K Brunker, STM Bucheli, M Carvalho, ... BioRxiv, 096883, 2016 | 28 | 2016 |
| Genomic epidemiology of SARS-CoV-2 spread in Scotland highlights the role of European travel in COVID-19 emergence ADS Filipe, J Shepherd, T Williams, J Hughes, E Aranday-Cortes, ... MedRxiv, 2020.06. 08.20124834, 2020 | 27 | 2020 |
| Genomic sequencing, evolution and molecular epidemiology of rabies virus K Brunker, SA Nadin-Davis, R Biek Revue scientifique et technique (International Office of Epizootics) 37 (2 …, 2018 | 26 | 2018 |
| Exploiting genetic information to trace plant virus dispersal in landscapes C Picard, S Dallot, K Brunker, K Berthier, P Roumagnac, S Soubeyrand, ... Annual Review of Phytopathology 55 (1), 139-160, 2017 | 22 | 2017 |
| Environmental risk factors for Ixodes ricinus ticks and their infestation on lambs in a changing ecosystem: Implications for tick control and the impact of woodland … L Gilbert, K Brunker, U Lande, I Klingen, L Grøva Agriculture, Ecosystems & Environment 237, 265-273, 2017 | 19 | 2017 |
| Epidemic waves of COVID-19 in Scotland: a genomic perspective on the impact of the introduction and relaxation of lockdown on SARS-CoV-2 SJ Lycett, J Hughes, MP McHugh, A da Silva Filipe, R Dewar, L Lu, ... MedRxiv, 2021.01. 08.20248677, 2021 | 14 | 2021 |
| Genetic epidemiology of SARS-CoV-2 transmission in renal dialysis units–A high risk community-hospital interface KK Li, YM Woo, O Stirrup, J Hughes, A Ho, ADS Filipe, N Johnson, ... Journal of Infection 83 (1), 96-103, 2021 | 12 | 2021 |
| Integrating contact tracing and whole-genome sequencing to track the elimination of dog-mediated rabies: an observational and genomic study K Lushasi, K Brunker, M Rajeev, EA Ferguson, G Jaswant, LL Baker, ... Elife 12, e85262, 2023 | 10 | 2023 |