Articoli con mandati relativi all'accesso pubblico - Sean SimmonsUlteriori informazioni
Disponibili pubblicamente: 22
Individual brain organoids reproducibly form cell diversity of the human cerebral cortex
S Velasco, AJ Kedaigle, SK Simmons, A Nash, M Rocha, G Quadrato, ...
Nature 570 (7762), 523-527, 2019
Mandati: US National Institutes of Health, Howard Hughes Medical Institute
Systematic comparison of single-cell and single-nucleus RNA-sequencing methods
J Ding, X Adiconis, SK Simmons, MS Kowalczyk, CC Hession, ...
Nature biotechnology 38 (6), 737-746, 2020
Mandati: US National Institutes of Health, Howard Hughes Medical Institute
Autism genes converge on asynchronous development of shared neuron classes
B Paulsen, S Velasco, AJ Kedaigle, M Pigoni, G Quadrato, AJ Deo, ...
Nature 602 (7896), 268-273, 2022
Mandati: US National Institutes of Health, Howard Hughes Medical Institute
In vivo Perturb-Seq reveals neuronal and glial abnormalities associated with autism risk genes
X Jin, SK Simmons, A Guo, AS Shetty, M Ko, L Nguyen, V Jokhi, ...
Science 370 (6520), eaaz6063, 2020
Mandati: US National Institutes of Health, Howard Hughes Medical Institute
Distinct subnetworks of the thalamic reticular nucleus
Y Li, VG Lopez-Huerta, X Adiconis, K Levandowski, S Choi, SK Simmons, ...
Nature 583 (7818), 819-824, 2020
Mandati: US National Institutes of Health, Human Frontier Science Program
Comprehensive comparative analysis of 5′-end RNA-sequencing methods
X Adiconis, AL Haber, SK Simmons, A Levy Moonshine, Z Ji, MA Busby, ...
Nature methods 15 (7), 505-511, 2018
Mandati: US National Institutes of Health, UK Medical Research Council
Enabling privacy-preserving GWASs in heterogeneous human populations
S Simmons, C Sahinalp, B Berger
Cell systems 3 (1), 54-61, 2016
Mandati: US National Institutes of Health, Natural Sciences and Engineering Research …
Effects of 3D culturing conditions on the transcriptomic profile of stem-cell-derived neurons
H Tekin, S Simmons, B Cummings, L Gao, X Adiconis, CC Hession, ...
Nature Biomedical Engineering 2 (7), 540-554, 2018
Mandati: US National Institutes of Health, Howard Hughes Medical Institute
Realizing privacy preserving genome-wide association studies
S Simmons, B Berger
Bioinformatics 32 (9), 1293-1300, 2016
Mandati: US National Science Foundation, US National Institutes of Health
Genetic analysis of isoform usage in the human anti-viral response reveals influenza-specific regulation of ERAP2 transcripts under balancing selection
CJ Ye, J Chen, AC Villani, RE Gate, M Subramaniam, T Bhangale, ...
Genome research 28 (12), 1812-1825, 2018
Mandati: US National Institutes of Health
The effect of background noise and its removal on the analysis of single-cell expression data
P Janssen, Z Kliesmete, B Vieth, X Adiconis, S Simmons, J Marshall, ...
Genome Biology 24 (1), 140, 2023
Mandati: German Research Foundation, Chan Zuckerberg Initiative
A single-cell map of antisense oligonucleotide activity in the brain
MA Mortberg, JE Gentile, NM Nadaf, C Vanderburg, S Simmons, ...
Nucleic Acids Research 51 (14), 7109-7124, 2023
Mandati: US National Institutes of Health
Mostly natural sequencing-by-synthesis for scRNA-seq using Ultima sequencing
SK Simmons, G Lithwick-Yanai, X Adiconis, F Oberstrass, N Iremadze, ...
Nature Biotechnology 41 (2), 204-211, 2023
Mandati: US National Institutes of Health, Howard Hughes Medical Institute
Privacy-preserving biomedical database queries with optimal privacy-utility trade-offs
H Cho, S Simmons, R Kim, B Berger
Cell systems 10 (5), 408-416. e9, 2020
Mandati: US National Institutes of Health
Heterochronic parabiosis reprograms the mouse brain transcriptome by shifting aging signatures in multiple cell types
M Ximerakis, KM Holton, RM Giadone, C Ozek, M Saxena, S Santiago, ...
Nature Aging 3 (3), 327-345, 2023
Mandati: US National Institutes of Health, Howard Hughes Medical Institute
Protecting genomic data privacy with probabilistic modeling
S Simmons, B Berger, C Sahinalp
BIOCOMPUTING 2019: Proceedings of the Pacific Symposium, 403-414, 2018
Mandati: US National Institutes of Health, Natural Sciences and Engineering Research …
Discovering what dimensionality reduction really tells us about RNA-Seq data
S Simmons, J Peng, J Bienkowska, B Berger
Journal of Computational Biology 22 (8), 715-728, 2015
Mandati: US National Institutes of Health
One size doesn't fit all: Measuring individual privacy in aggregate genomic data
S Simmons, B Berger
2015 IEEE Security and Privacy Workshops, 41-49, 2015
Mandati: US National Institutes of Health, Wellcome Trust
Massively parallel in vivo Perturb-seq reveals cell-type-specific transcriptional networks in cortical development
X Zheng, B Wu, Y Liu, SK Simmons, K Kim, GS Clarke, A Ashiq, J Park, ...
Cell, 2024
Mandati: Chan Zuckerberg Initiative
Pluripotent stem cell-derived models of neurological diseases reveal early transcriptional heterogeneity
M Sorek, W Oweis, M Nissim-Rafinia, M Maman, S Simon, CC Hession, ...
Genome Biology 22, 1-25, 2021
Mandati: US Department of Defense, US National Institutes of Health, Howard Hughes …
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