| SARS-CoV-2 receptor ACE2 is an interferon-stimulated gene in human airway epithelial cells and is detected in specific cell subsets across tissues CGK Ziegler, SJ Allon, SK Nyquist, IM Mbano, VN Miao, CN Tzouanas, ... Cell 181 (5), 1016-1035. e19, 2020 | 2453 | 2020 |
| Efficient Bayesian mixed-model analysis increases association power in large cohorts PR Loh, G Tucker, BK Bulik-Sullivan, BJ Vilhjálmsson, HK Finucane, ... Nature genetics 47 (3), 284-290, 2015 | 1632 | 2015 |
| Ancient human genomes suggest three ancestral populations for present-day Europeans I Lazaridis, N Patterson, A Mittnik, G Renaud, S Mallick, K Kirsanow, ... Nature 513 (7518), 409-413, 2014 | 1594 | 2014 |
| Identification of Functional Elements and Regulatory Circuits by Drosophila modENCODE modENCODE Consortium, S Roy, J Ernst, PV Kharchenko, P Kheradpour, ... Science 330 (6012), 1787-1797, 2010 | 1102 | 2010 |
| Global alignment of multiple protein interaction networks with application to functional orthology detection R Singh, J Xu, B Berger Proceedings of the National Academy of Sciences 105 (35), 12763-12768, 2008 | 1097* | 2008 |
| Positive-unlabeled convolutional neural networks for particle picking in cryo-electron micrographs T Bepler, A Morin, M Rapp, J Brasch, L Shapiro, AJ Noble, B Berger Nature methods 16 (11), 1153-1160, 2019 | 971 | 2019 |
| MultiCoil: a program for predicting two‐and three‐stranded coiled coils E Wolf, PS Kim, B Berger Protein Science 6 (6), 1179-1189, 1997 | 924 | 1997 |
| Predicting coiled coils by use of pairwise residue correlations. B Berger, DB Wilson, E Wolf, T Tonchev, M Milla, PS Kim Proceedings of the National Academy of Sciences 92 (18), 8259-8263, 1995 | 834 | 1995 |
| ARACHNE: a whole-genome shotgun assembler S Batzoglou, DB Jaffe, K Stanley, J Butler, S Gnerre, E Mauceli, B Berger, ... Genome research 12 (1), 177-189, 2002 | 793 | 2002 |
| Efficient integration of heterogeneous single-cell transcriptomes using Scanorama B Hie, B Bryson, B Berger Nature biotechnology 37 (6), 685-691, 2019 | 749 | 2019 |
| An integrative approach to ortholog prediction for disease-focused and other functional studies Y Hu, I Flockhart, A Vinayagam, C Bergwitz, B Berger, N Perrimon, ... BMC bioinformatics 12, 1-16, 2011 | 743 | 2011 |
| Protein folding in the hydrophobic-hydrophilic (HP) is NP-complete B Berger, T Leighton Proceedings of the second annual international conference on Computational …, 1998 | 733 | 1998 |
| Widespread macromolecular interaction perturbations in human genetic disorders N Sahni, S Yi, M Taipale, JIF Bass, J Coulombe-Huntington, F Yang, ... Cell 161 (3), 647-660, 2015 | 594 | 2015 |
| Human and mouse gene structure: comparative analysis and application to exon prediction S Batzoglou, L Pachter, J Mesirov, B Berger, ES Lander Proceedings of the fourth annual international conference on Computational …, 2000 | 592 | 2000 |
| Paircoil2: improved prediction of coiled coils from sequence AV McDonnell, T Jiang, AE Keating, B Berger Bioinformatics 22 (3), 356-358, 2006 | 518 | 2006 |
| Inferring admixture histories of human populations using linkage disequilibrium PR Loh, M Lipson, N Patterson, P Moorjani, JK Pickrell, D Reich, B Berger Genetics 193 (4), 1233-1254, 2013 | 499 | 2013 |
| CryoDRGN: reconstruction of heterogeneous cryo-EM structures using neural networks ED Zhong, T Bepler, B Berger, JH Davis Nature methods 18 (2), 176-185, 2021 | 498 | 2021 |
| IsoRankN: spectral methods for global alignment of multiple protein networks CS Liao, K Lu, M Baym, R Singh, B Berger Bioinformatics 25 (12), i253-i258, 2009 | 497 | 2009 |
| Herpesviral protein networks and their interaction with the human proteome P Uetz, YA Dong, C Zeretzke, C Atzler, A Baiker, B Berger, SV Rajagopala, ... Science 311 (5758), 239-242, 2006 | 497 | 2006 |
| Allergic inflammatory memory in human respiratory epithelial progenitor cells J Ordovas-Montanes, DF Dwyer, SK Nyquist, KM Buchheit, M Vukovic, ... Nature 560 (7720), 649-654, 2018 | 490 | 2018 |