| Bioconda: sustainable and comprehensive software distribution for the life sciences. B Grüning, R Dale, A Sjödin, BA Chapman, J Rowe, CH Tomkins-Tinch, ... Nature methods 15 (7), 475, 2018 | 1138 | 2018 |
| Genome evolution in the allotetraploid frog Xenopus laevis AM Session, Y Uno, T Kwon, JA Chapman, A Toyoda, S Takahashi, ... Nature 538 (7625), 336-343, 2016 | 983 | 2016 |
| β-Glucan Reverses the Epigenetic State of LPS-Induced Immunological Tolerance B Novakovic, E Habibi, SY Wang, RJW Arts, R Davar, W Megchelenbrink, ... Cell 167 (5), 1354-1368. e14, 2016 | 598 | 2016 |
| ChIP-Seq of ERα and RNA polymerase II defines genes differentially responding to ligands WJ Welboren, MA Van Driel, EM Janssen-Megens, SJ Van Heeringen, ... The EMBO journal 28 (10), 1418-1428, 2009 | 479 | 2009 |
| Genome-Wide Profiling of Liver X Receptor, Retinoid X Receptor, and Peroxisome Proliferator-Activated Receptor α in Mouse Liver Reveals Extensive Sharing of Binding Sites M Boergesen, TÅ Pedersen, B Gross, SJ van Heeringen, D Hagenbeek, ... Molecular and Cellular Biology 32 (4), 852-867, 2012 | 269 | 2012 |
| A hierarchy of H3K4me3 and H3K27me3 acquisition in spatial gene regulation in Xenopus embryos RC Akkers, SJ van Heeringen, UG Jacobi, EM Janssen-Megens, ... Developmental cell 17 (3), 425-434, 2009 | 263 | 2009 |
| Dynamics of enhancer chromatin signatures mark the transition from pluripotency to cell specification during embryogenesis O Bogdanović, A Fernandez-Miñán, JJ Tena, E de la Calle-Mustienes, ... Genome Research 22 (10), 2043-2053, 2012 | 260 | 2012 |
| Enrichment of gene-coding sequences in maize by genome filtration CA Whitelaw, WB Barbazuk, G Pertea, AP Chan, F Cheung, Y Lee, ... Science 302 (5653), 2118-2120, 2003 | 255 | 2003 |
| Amphioxus functional genomics and the origins of vertebrate gene regulation F Marlétaz, PN Firbas, I Maeso, JJ Tena, O Bogdanovic, M Perry, ... Nature, 1, 2018 | 253 | 2018 |
| Characterization of genome-wide p53-binding sites upon stress response L Smeenk, SJ Van Heeringen, M Koeppel, MA Van Driel, SJJ Bartels, ... Nucleic acids research 36 (11), 3639-3654, 2008 | 237 | 2008 |
| Role of p53 serine 46 in p53 target gene regulation L Smeenk, SJ Van Heeringen, M Koeppel, B Gilbert, E Janssen-Megens, ... PloS one 6 (3), e17574, 2011 | 203 | 2011 |
| MTF2 recruits Polycomb Repressive Complex 2 by helical-shape-selective DNA binding M Perino, G van Mierlo, ID Karemaker, S van Genesen, M Vermeulen, ... Nature genetics 50 (7), 1002-1010, 2018 | 183 | 2018 |
| Genome-wide profiling of p63 DNA–binding sites identifies an element that regulates gene expression during limb development in the 7q21 SHFM1 locus EN Kouwenhoven, SJ Van Heeringen, JJ Tena, M Oti, BE Dutilh, ... PLoS Genet 6 (8), e1001065, 2010 | 182 | 2010 |
| GimmeMotifs: a de novo motif prediction pipeline for ChIP-sequencing experiments SJ van Heeringen, GJC Veenstra Bioinformatics 27 (2), 270-271, 2011 | 180 | 2011 |
| Chromatin Accessibility-Based Characterization of the Gene Regulatory Network Underlying Plasmodium falciparum Blood-Stage Development CG Toenhake, SAK Fraschka, MS Vijayabaskar, DR Westhead, ... Cell host & microbe 23 (4), 557-569. e9, 2018 | 177 | 2018 |
| Transcription factor p63 bookmarks and regulates dynamic enhancers during epidermal differentiation EN Kouwenhoven, M Oti, H Niehues, SJ van Heeringen, J Schalkwijk, ... EMBO reports 16 (7), 863-878, 2015 | 162 | 2015 |
| Embryonic transcription is controlled by maternally defined chromatin state S Hontelez, I Van Kruijsbergen, G Georgiou, SJ Van Heeringen, ... Nature communications 6 (1), 1-13, 2015 | 109 | 2015 |
| Temporal uncoupling of the DNA methylome and transcriptional repression during embryogenesis O Bogdanović, SW Long, SJ van Heeringen, AB Brinkman, ... Genome Research 21 (8), 1313-1327, 2011 | 107 | 2011 |
| Predicting protein condensate formation using machine learning G van Mierlo, JRG Jansen, J Wang, I Poser, SJ van Heeringen, ... Cell Reports 34 (5), 108705, 2021 | 86 | 2021 |
| Principles of nucleation of H3K27 methylation during embryonic development SJ van Heeringen, RC Akkers, I van Kruijsbergen, MA Arif, LLP Hanssen, ... Genome Research, gr. 159608.113, 2013 | 75 | 2013 |
Gert Jan C. VeenstraProfessor of Molecular Developmental Biology, Radboud UniversityEmail verificata su science.ru.nl
