Articoli con mandati relativi all'accesso pubblico - Akira FunahashiUlteriori informazioni
Disponibili pubblicamente: 26
The systems biology graphical notation
NL Novère, M Hucka, H Mi, S Moodie, F Schreiber, A Sorokin, E Demir, ...
Nature biotechnology 27 (8), 735-741, 2009
Mandati: US National Institutes of Health
SBML Level 3: an extensible format for the exchange and reuse of biological models
SM Keating, D Waltemath, M König, F Zhang, A Dräger, C Chaouiya, ...
Molecular systems biology 16 (8), e9110, 2020
Mandati: US National Science Foundation, US Department of Energy, US National …
COVID-19 Disease Map, building a computational repository of SARS-CoV-2 virus-host interaction mechanisms
M Ostaszewski, A Mazein, ME Gillespie, I Kuperstein, A Niarakis, ...
Scientific data 7 (1), 136, 2020
Mandati: US National Institutes of Health
Software support for SBGN maps: SBGN-ML and LibSBGN
MP Van Iersel, AC Villéger, T Czauderna, SE Boyd, FT Bergmann, A Luna, ...
Bioinformatics 28 (15), 2016-2021, 2012
Mandati: US National Institutes of Health
COVID19 Disease Map, a computational knowledge repository of virus–host interaction mechanisms
M Ostaszewski, A Niarakis, A Mazein, I Kuperstein, R Phair, ...
Molecular systems biology 17 (10), e10387, 2021
Mandati: US Department of Energy, US National Institutes of Health, European …
High-speed microscopy with an electrically tunable lens to image the dynamics of in vivo molecular complexes
Y Nakai, M Ozeki, T Hiraiwa, R Tanimoto, A Funahashi, N Hiroi, ...
Review of Scientific Instruments 86 (1), 2015
Mandati: Cancer Research UK
The DBCLS BioHackathon: standardization and interoperability for bioinformatics web services and workflows
T Katayama, K Arakawa, M Nakao, K Ono, KF Aoki-Kinoshita, ...
Journal of biomedical semantics 1, 1-19, 2010
Mandati: US National Institutes of Health
The systems biology simulation core algorithm
R Keller, A Dörr, A Tabira, A Funahashi, MJ Ziller, R Adams, N Rodriguez, ...
BMC systems biology 7, 1-16, 2013
Mandati: German Research Foundation, UK Biotechnology and Biological Sciences …
A proteomic study of mitotic phase-specific interactors of EB1 reveals a role for SXIP-mediated protein interactions in anaphase onset
N Tamura, JE Simon, A Nayak, R Shenoy, N Hiroi, V Boilot, A Funahashi, ...
Biology open 4 (2), 155-169, 2015
Mandati: Cancer Research UK
Automated tracking of mitotic spindle pole positions shows that LGN is required for spindle rotation but not orientation maintenance
AM Corrigan, RL Shrestha, I Zulkipli, N Hiroi, Y Liu, N Tamura, B Yang, ...
Cell Cycle 12 (16), 2643-2655, 2013
Mandati: Cancer Research UK
BioSimulators: a central registry of simulation engines and services for recommending specific tools
B Shaikh, LP Smith, D Vasilescu, G Marupilla, M Wilson, E Agmon, ...
Nucleic acids research 50 (W1), W108-W114, 2022
Mandati: US National Institutes of Health
BioPAX support in CellDesigner
H Mi, A Muruganujan, E Demir, Y Matsuoka, A Funahashi, H Kitano, ...
Bioinformatics 27 (24), 3437-3438, 2011
Mandati: US National Institutes of Health
Transcriptome analysis of the anhydrobiotic cell line Pv11 infers the mechanism of desiccation tolerance and recovery
TG Yamada, Y Suetsugu, R Deviatiiarov, O Gusev, R Cornette, ...
Scientific reports 8 (1), 17941, 2018
Mandati: European Commission
Identification of a master transcription factor and a regulatory mechanism for desiccation tolerance in the anhydrobiotic cell line Pv11
TG Yamada, Y Hiki, NF Hiroi, E Shagimardanova, O Gusev, R Cornette, ...
PLoS One 15 (3), e0230218, 2020
Mandati: European Commission
Practical implementation of a network-based stochastic biochemical simulation system on an FPGA
M Yoshimi, Y Nishikawa, Y Osana, A Funahashi, Y Shibata, H Yamada, ...
2008 International Conference on Field Programmable Logic and Applications …, 2008
Mandati: US National Institutes of Health
SBML level 3 package: spatial processes, version 1, release 1
JC Schaff, A Lakshminarayana, RF Murphy, FT Bergmann, A Funahashi, ...
Journal of Integrative Bioinformatics 20 (1), 20220054, 2023
Mandati: US National Science Foundation, US National Institutes of Health, Federal …
An explainable deep learning-based algorithm with an attention mechanism for predicting the live birth potential of mouse embryos
Y Tokuoka, TG Yamada, D Mashiko, Z Ikeda, TJ Kobayashi, K Yamagata, ...
Artificial Intelligence in Medicine 134, 102432, 2022
Mandati: Japan Science and Technology Agency
From microscopy data to in silico environments for in vivo-oriented simulations
N Hiroi, M Klann, K Iba, P Heras Ciechomski, S Yamashita, A Tabira, ...
EURASIP Journal on Bioinformatics and Systems Biology 2012, 1-11, 2012
Mandati: Swiss National Science Foundation
Drug-target identification in COVID-19 disease mechanisms using computational systems biology approaches
A Niarakis, M Ostaszewski, A Mazein, I Kuperstein, M Kutmon, ...
Frontiers in Immunology 14, 1282859, 2024
Mandati: European Commission, Netherlands Organisation for Health Research and …
Temperature elevation detection in migrating cells
T Nakamura, J Sakamoto, K Okabe, A Taniguchi, TG Yamada, S Nonaka, ...
Optics Continuum 1 (5), 1085-1097, 2022
Mandati: US National Institutes of Health
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