Articoli con mandati relativi all'accesso pubblico - Dennis ShashaUlteriori informazioni
Non disponibili pubblicamente: 7
Positive-unlabeled learning in the face of labeling bias
N Youngs, D Shasha, R Bonneau
2015 IEEE International Conference on Data Mining Workshop (ICDMW), 639-645, 2015
Mandati: US National Institutes of Health
Fast methods for finding significant motifs on labelled multi-relational networks
G Micale, A Pulvirenti, A Ferro, R Giugno, D Shasha
Journal of Complex Networks 7 (6), 817-837, 2019
Mandati: US National Science Foundation, Governo Italiano
Fast subgraph matching strategies based on pattern-only heuristics
A Aparo, V Bonnici, G Micale, A Ferro, D Shasha, A Pulvirenti, R Giugno
Interdisciplinary Sciences: Computational Life Sciences 11, 21-32, 2019
Mandati: US National Science Foundation, Governo Italiano
glabtrie: A data structure for motif discovery with constraints
M Mongioví, G Micale, A Ferro, R Giugno, A Pulvirenti, D Shasha
Graph Data Management: Fundamental Issues and Recent Developments, 71-95, 2018
Mandati: US National Science Foundation
Calibrating a 4-channel fully-digital 60 GHz SDR
A Dhananjay, K Zheng, J Haarla, L Iotti, M Mezzavilla, D Shasha, ...
Proceedings of the 14th International Workshop on Wireless Network Testbeds …, 2020
Mandati: US National Science Foundation
Fully-digital beamforming demonstration with Pi-Radio mmWave SDR platform
A Dhananjay, K Zheng, M Mezzavilla, D Shasha, S Rangan
Proceedings of the Twenty-First International Symposium on Theory …, 2020
Mandati: US National Science Foundation
Life Science Workflow Services (LifeSWS): Motivations and Architecture
R Akbarinia, C Botella, A Joly, F Masseglia, M Mattoso, E Ogasawara, ...
Transactions on Large-Scale Data-and Knowledge-Centered Systems LV, 1-24, 2023
Mandati: European Commission
Disponibili pubblicamente: 57
An expanded evaluation of protein function prediction methods shows an improvement in accuracy
Y Jiang, TR Oron, WT Clark, AR Bankapur, D D’Andrea, R Lepore, ...
Genome biology 17, 1-19, 2016
Mandati: US National Science Foundation, US Department of Energy, Swiss National …
Nitrogen economics of root foraging: transitive closure of the nitrate–cytokinin relay and distinct systemic signaling for N supply vs. demand
S Ruffel, G Krouk, D Ristova, D Shasha, KD Birnbaum, GM Coruzzi
Proceedings of the National Academy of Sciences 108 (45), 18524-18529, 2011
Mandati: US National Institutes of Health
VirtualPlant: a software platform to support systems biology research
MS Katari, SD Nowicki, FF Aceituno, D Nero, J Kelfer, LP Thompson, ...
Plant physiology 152 (2), 500-515, 2010
Mandati: US National Institutes of Health
Predictive network modeling of the high-resolution dynamic plant transcriptome in response to nitrate
G Krouk, P Mirowski, Y LeCun, DE Shasha, GM Coruzzi
Genome biology 11, 1-19, 2010
Mandati: US National Institutes of Health
Reprozip: Computational reproducibility with ease
F Chirigati, R Rampin, D Shasha, J Freire
Proceedings of the 2016 international conference on management of data, 2085 …, 2016
Mandati: US National Science Foundation
Temporal transcriptional logic of dynamic regulatory networks underlying nitrogen signaling and use in plants
K Varala, A Marshall-Colón, J Cirrone, MD Brooks, AV Pasquino, S Léran, ...
Proceedings of the National Academy of Sciences 115 (25), 6494-6499, 2018
Mandati: US National Science Foundation, US National Institutes of Health
Network Walking charts transcriptional dynamics of nitrogen signaling by integrating validated and predicted genome-wide interactions
MD Brooks, J Cirrone, AV Pasquino, JM Alvarez, J Swift, S Mittal, ...
Nature communications 10 (1), 1569, 2019
Mandati: US National Institutes of Health
Computational reproducibility: state-of-the-art, challenges, and database research opportunities
J Freire, P Bonnet, D Shasha
Proceedings of the 2012 ACM SIGMOD international conference on management of …, 2012
Mandati: US National Institutes of Health
Gene regulatory networks in plants: learning causality from time and perturbation
G Krouk, J Lingeman, AM Colon, G Coruzzi, D Shasha
Genome biology 14, 1-7, 2013
Mandati: US National Institutes of Health
Cell-by-cell dissection of phloem development links a maturation gradient to cell specialization
P Roszak, J Heo, B Blob, K Toyokura, Y Sugiyama, MA de Luis Balaguer, ...
Science 374 (6575), eaba5531, 2021
Mandati: US National Science Foundation, US National Institutes of Health, Research …
Grapes: A software for parallel searching on biological graphs targeting multi-core architectures
R Giugno, V Bonnici, N Bombieri, A Pulvirenti, A Ferro, D Shasha
PloS one 8 (10), e76911, 2013
Mandati: US National Institutes of Health
A systems approach uncovers restrictions for signal interactions regulating genome-wide responses to nutritional cues in Arabidopsis
G Krouk, D Tranchina, L Lejay, AA Cruikshank, D Shasha, GM Coruzzi, ...
PLoS computational biology 5 (3), e1000326, 2009
Mandati: US National Institutes of Health
An integrated genetic, genomic and systems approach defines gene networks regulated by the interaction of light and carbon signaling pathways in Arabidopsis
KE Thum, MJ Shin, RA Gutiérrez, I Mukherjee, MS Katari, D Nero, ...
BMC systems biology 2, 1-19, 2008
Mandati: US National Institutes of Health
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