| Multiscale 3D Genome Rewiring during Mouse Neural Development B Bonev, NM Cohen, Q Szabo, L Fritsch, GL Papadopoulos, Y Lubling, ... Cell 171 (3), 557-572. e24, 2017 | 1231 | 2017 |
| Organization and function of the 3D genome B Bonev, G Cavalli Nature Reviews Genetics 17 (11), 661, 2016 | 1171 | 2016 |
| Multiple knockout mouse models reveal lincRNAs are required for life and brain development M Sauvageau, LA Goff, S Lodato, B Bonev, AF Groff, C Gerhardinger, ... Elife 2, e01749, 2013 | 751 | 2013 |
| microRNA-9 regulates axon extension and branching by targeting Map1b in mouse cortical neurons F Dajas-Bailador, B Bonev, P Garcez, P Stanley, F Guillemot, ... Nature neuroscience 15 (5), 697, 2012 | 318 | 2012 |
| TADs are 3D structural units of higher-order chromosome organization in Drosophila Q Szabo, D Jost, JM Chang, DI Cattoni, GL Papadopoulos, B Bonev, ... Science Advances 4 (2), eaar8082, 2018 | 266 | 2018 |
| MicroRNA-9 Modulates Hes1 Ultradian Oscillations by Forming a Double-Negative Feedback Loop B Bonev, P Stanley, N Papalopulu Cell reports 2 (1), 10-18, 2012 | 202 | 2012 |
| MicroRNA-9 reveals regional diversity of neural progenitors along the anterior-posterior axis B Bonev, A Pisco, N Papalopulu Developmental cell 20 (1), 19-32, 2011 | 186 | 2011 |
| Regulation of single-cell genome organization into TADs and chromatin nanodomains Q Szabo, A Donjon, I Jerković, GL Papadopoulos, T Cheutin, B Bonev, ... Nature Genetics 52 (11), 1151-1157, 2020 | 150 | 2020 |
| 4D genome rewiring during oncogene-induced and replicative senescence S Sati, B Bonev, Q Szabo, D Jost, P Bensadoun, F Serra, V Loubiere, ... Molecular cell 78 (3), 522-538. e9, 2020 | 147 | 2020 |
| Stable Polycomb-dependent transgenerational inheritance of chromatin states in Drosophila F Ciabrelli, F Comoglio, S Fellous, B Bonev, M Ninova, Q Szabo, ... Nature genetics 49 (6), 876, 2017 | 114 | 2017 |
| MeCP2 represses the rate of transcriptional initiation of highly methylated long genes LD Boxer, W Renthal, AW Greben, T Whitwam, A Silberfeld, H Stroud, E Li, ... Molecular cell 77 (2), 294-309. e9, 2020 | 96 | 2020 |
| Genome-wide analysis of gene expression during Xenopus tropicalis tadpole tail regeneration NR Love, Y Chen, B Bonev, MJ Gilchrist, L Fairclough, R Lea, TJ Mohun, ... BMC developmental biology 11 (1), 70, 2011 | 94 | 2011 |
| Coordinate redeployment of PRC1 proteins suppresses tumor formation during Drosophila development V Loubiere, A Delest, A Thomas, B Bonev, B Schuettengruber, S Sati, ... Nature genetics 48 (11), 1436, 2016 | 83 | 2016 |
| FoxG1 and TLE2 act cooperatively to regulate ventral telencephalon formation M Roth, B Bonev, J Lindsay, R Lea, N Panagiotaki, C Houart, ... Development 137 (9), 1553-1562, 2010 | 80 | 2010 |
| Multimodal profiling of the transcriptional regulatory landscape of the developing mouse cortex identifies Neurog2 as a key epigenome remodeler F Noack, S Vangelisti, G Raffl, M Carido, J Diwakar, F Chong, B Bonev Nature Neuroscience, 1-14, 2022 | 42 | 2022 |
| Multicolor fluorescent in situ mRNA hybridization (FISH) on whole mounts and sections R Lea, B Bonev, E Dubaissi, PD Vize, N Papalopulu Xenopus Protocols, 431-444, 2012 | 23 | 2012 |
| Decoding the organization, dynamics, and function of the 4D genome E Aboelnour, B Bonev Developmental Cell, 2021 | 18 | 2021 |
| Innate immune memory after brain injury drives inflammatory cardiac dysfunction A Simats, S Zhang, D Messerer, F Chong, S Beşkardeş, AS Chivukula, ... Cell 187 (17), 4637-4655. e26, 2024 | 11 | 2024 |
| Direct neuronal reprogramming of mouse astrocytes is associated with multiscale epigenome remodeling and requires Yy1 A Pereira, J Diwakar, G Masserdotti, S Beşkardeş, T Simon, Y So, ... Nature Neuroscience, 1-14, 2024 | 5 | 2024 |
| Joint epigenome profiling reveals cell-type-specific gene regulatory programmes in human cortical organoids F Noack, S Vangelisti, N Ditzer, F Chong, M Albert, B Bonev Nature Cell Biology 25 (12), 1873-1883, 2023 | 5 | 2023 |