| Durable coexistence of donor and recipient strains after fecal microbiota transplantation SS Li, A Zhu, V Benes, PI Costea, R Hercog, F Hildebrand, ... Science 352 (6285), 586-589, 2016 | 571 | 2016 |
| Extensive transmission of microbes along the gastrointestinal tract TSB Schmidt, MR Hayward, LP Coelho, SS Li, PI Costea, AY Voigt, ... eLife 8, e42693, 2019 | 456 | 2019 |
| Temporal and technical variability of human gut metagenomes AY Voigt, PI Costea, JR Kultima, SS Li, G Zeller, S Sunagawa, P Bork Genome biology 16 (1), 73, 2015 | 196 | 2015 |
| MOCAT2: a metagenomic assembly, annotation and profiling framework JR Kultima, LP Coelho, K Forslund, J Huerta-Cepas, SS Li, M Driessen, ... Bioinformatics 32 (16), 2520-2523, 2016 | 186 | 2016 |
| proGenomes: a resource for consistent functional and taxonomic annotations of prokaryotic genomes DR Mende, I Letunic, J Huerta-Cepas, SS Li, K Forslund, S Sunagawa, ... Nucleic acids research 45 (D1), D529-D534, 2017 | 125 | 2017 |
| Drivers and determinants of strain dynamics following fecal microbiota transplantation TSB Schmidt, SS Li, OM Maistrenko, W Akanni, LP Coelho, S Dolai, ... Nature medicine 28 (9), 1902-1912, 2022 | 115 | 2022 |
| Disentangling the impact of environmental and phylogenetic constraints on prokaryotic within-species diversity OM Maistrenko, DR Mende, M Luetge, F Hildebrand, TSB Schmidt, SS Li, ... The ISME journal 14 (5), 1247-1259, 2020 | 103 | 2020 |
| A genome-wide screen in yeast identifies specific oxidative stress genes required for the maintenance of sub-cellular redox homeostasis A Ayer, S Fellermeier, C Fife, SS Li, G Smits, AJ Meyer, IW Dawes, ... Public Library of Science 7 (9), e44278, 2012 | 49 | 2012 |
| Sequencing and validation of the genome of a Campylobacter concisus reveals intra-species diversity NP Deshpande, NO Kaakoush, H Mitchell, K Janitz, MJ Raftery, SS Li, ... PLoS One 6 (7), e22170, 2011 | 47 | 2011 |
| Bacterial resistance to CRISPR-Cas antimicrobials RV Uribe, C Rathmer, LJ Jahn, MMH Ellabaan, SS Li, MOA Sommer Scientific reports 11 (1), 1-9, 2021 | 45 | 2021 |
| Time-course proteome analysis reveals the dynamic response of Cryptococcus gattii cells to fluconazole HS Chong, L Campbell, MP Padula, C Hill, E Harry, SS Li, MR Wilkins, ... PloS one 7 (8), e42835, 2012 | 23 | 2012 |
| Proteins deleterious on overexpression are associated with high intrinsic disorder, specific interaction domains, and low abundance L Ma, CNI Pang, SS Li, MR Wilkins Journal of Proteome Research 9 (3), 1218-1225, 2010 | 23 | 2010 |
| Four‐dimensional visualisation and analysis of protein–protein interaction networks A Goel, SS Li, MR Wilkins Proteomics 11 (13), 2672-2682, 2011 | 22 | 2011 |
| Visualization and analysis of the complexome network of Saccharomyces cerevisiae SS Li, K Xu, MR Wilkins Journal of proteome research 10 (10), 4744-4756, 2011 | 21 | 2011 |
| The Interactorium: Visualising proteins, complexes and interaction networks in a virtual 3‐D cell YY Widjaja, CNI Pang, SS Li, MR Wilkins, TD Lambert Proteomics 9 (23), 5309-5315, 2009 | 18 | 2009 |
| Molecular interaction networks for the analysis of human disease: Utility, limitations, and considerations SJ Schramm, V Jayaswal, A Goel, SS Li, YH Yang, GJ Mann, MR Wilkins Proteomics 13 (23-24), 3393-3405, 2013 | 15 | 2013 |
| Visualization of the interactome: What are we looking at? DCY Fung, SS Li, A Goel, SH Hong, MR Wilkins Proteomics 12 (10), 1669-1686, 2012 | 15 | 2012 |
| A Multidimensional Matrix for Systems Biology Research and Its Application to Interaction Networks CNI Pang, A Goel, SS Li, MR Wilkins Journal of Proteome Research 11 (11), 5204-5220, 2012 | 14 | 2012 |
| Disturbed protein–protein interaction networks in metastatic melanoma are associated with worse prognosis and increased functional mutation burden SJ Schramm, SS Li, V Jayaswal, DCY Fung, AE Campain, CNI Pang, ... Pigment cell & melanoma research 26 (5), 708-722, 2013 | 13 | 2013 |
| Strain dynamics of contaminating bacteria modulate the yield of ethanol biorefineries FS de Oliveira Lino, S Garg, SS Li, MA Misiakou, K Kang, ... Nature Communications 15 (1), 5323, 2024 | | 2024 |
Peer BorkDirector of EMBL HeidelbergEmail verificata su embl.de