| Detecting protein complexes in a PPI network: a gene ontology based multi-objective evolutionary approach A Mukhopadhyay, S Ray, M De Molecular BioSystems 8 (11), 3036-3048, 2012 | 63 | 2012 |
| Incorporating the type and direction information in predicting novel regulatory interactions between HIV-1 and human proteins using a biclustering approach A Mukhopadhyay, S Ray, U Maulik BMC bioinformatics 15, 1-22, 2014 | 50 | 2014 |
| A review of in silico approaches for analysis and prediction of HIV-1-human protein–protein interactions S Bandyopadhyay, S Ray, A Mukhopadhyay, U Maulik Briefings in bioinformatics 16 (5), 830-851, 2015 | 35 | 2015 |
| A multiobjective approach for identifying protein complexes and studying their association in multiple disorders S Bandyopadhyay, S Ray, A Mukhopadhyay, U Maulik Algorithms for Molecular Biology 10, 1-15, 2015 | 31 | 2015 |
| A comprehensive analysis on preservation patterns of gene co-expression networks during Alzheimer’s disease progression S Ray, SMM Hossain, L Khatun, A Mukhopadhyay BMC bioinformatics 18, 1-21, 2017 | 23 | 2017 |
| A NMF based approach for integrating multiple data sources to predict HIV-1–human PPIs S Ray, S Bandyopadhyay BMC Bioinformatics 17 (121), doi: 10.1186/s12859-016-0952-6, 2016 | 22 | 2016 |
| Identifying differentially coexpressed module during HIV disease progression: A multiobjective approach S Ray, U Maulik Scientific reports 7 (1), 86, 2017 | 19 | 2017 |
| Discovering key transcriptomic regulators in pancreatic ductal adenocarcinoma using Dirichlet process Gaussian mixture model SMM Hossain, AA Halsana, L Khatun, S Ray, A Mukhopadhyay Scientific reports 11 (1), 7853, 2021 | 18 | 2021 |
| Predicting potential drug targets and repurposable drugs for covid-19 via a deep generative model for graphs S Ray, S Lall, A Mukhopadhyay, S Bandyopadhyay, A Schönhuth arXiv preprint arXiv:2007.02338, 2020 | 18 | 2020 |
| Preservation affinity in consensus modules among stages of HIV-1 progression SM Mosaddek Hossain, S Ray, A Mukhopadhyay BMC bioinformatics 18, 1-23, 2017 | 16 | 2017 |
| Pan-cancer classification by regularized multi-task learning SMM Hossain, L Khatun, S Ray, A Mukhopadhyay Scientific reports 11 (1), 24252, 2021 | 15 | 2021 |
| sc-REnF: An entropy guided robust feature selection for single-cell RNA-seq data S Lall, A Ghosh, S Ray, S Bandyopadhyay Briefings in Bioinformatics 23 (2), bbab517, 2022 | 14 | 2022 |
| RgCop-A regularized copula based method for gene selection in single-cell RNA-seq data S Lall, S Ray, S Bandyopadhyay PLoS computational biology 17 (10), e1009464, 2021 | 14 | 2021 |
| CODC: a Copula-based model to identify differential coexpression S Ray, S Lall, S Bandyopadhyay NPJ systems biology and applications 6 (1), 20, 2020 | 14 | 2020 |
| Identifying protein complexes in PPI network using non-cooperative sequential game. U Maulik, S Basu, S Ray Scientific Reports 7 (1), doi: 10.1038/s41598-017-08760, 2017 | 13 | 2017 |
| Discovering condition specific topological pattern changes in coexpression network: an application to HIV-1 progression S Ray, S Bandyopadhyay IEEE/ACM transactions on computational biology and bioinformatics 13 (6 …, 2015 | 13 | 2015 |
| A multiobjective go based approach to protein complex detection S Ray, M De, A Mukhopadhyay Procedia Technology 4, 555-560, 2012 | 13 | 2012 |
| Discovering preservation pattern from co-expression modules in progression of HIV-1 disease: An eigengene based approach S Ray, SMM Hossain, L Khatun 2016 International Conference on Advances in Computing, Communications and …, 2016 | 12 | 2016 |
| Predicting annotated HIV-1-Human PPIs using a biclustering approach to association rule mining S Ray, A Mukhopadhyay, U Maulik 2012 Third International Conference on Emerging Applications of Information …, 2012 | 11 | 2012 |
| DTI-SNNFRA: Drug-target interaction prediction by shared nearest neighbors and fuzzy-rough approximation SM Islam, SMM Hossain, S Ray PLoS One 16 (2), e0246920, 2021 | 10 | 2021 |
Anirban MukhopadhyayProfessor of Department of Computer Science and Engineering, University of Kalyani, IndiaEmail verificata su klyuniv.ac.in