| Gene-expression profiles and transcriptional regulatory pathways that underlie the identity and diversity of mouse tissue macrophages EL Gautier, T Shay, J Miller, M Greter, C Jakubzick, S Ivanov, J Helft, ... Nature immunology 13 (11), 1118-1128, 2012 | 2183 | 2012 |
| Variation in the human immune system is largely driven by non-heritable influences P Brodin, V Jojic, T Gao, S Bhattacharya, CJL Angel, D Furman, ... Cell 160 (1), 37-47, 2015 | 1106 | 2015 |
| Deciphering the transcriptional network of the dendritic cell lineage JC Miller, BD Brown, T Shay, EL Gautier, V Jojic, A Cohain, G Pandey, ... Nature immunology 13 (9), 888-899, 2012 | 845 | 2012 |
| Systems analysis of sex differences reveals an immunosuppressive role for testosterone in the response to influenza vaccination D Furman, BP Hejblum, N Simon, V Jojic, CL Dekker, R Thiébaut, ... Proceedings of the National Academy of Sciences 111 (2), 869-874, 2014 | 724 | 2014 |
| Transcriptional profiling of stroma from inflamed and resting lymph nodes defines immunological hallmarks D Malhotra, AL Fletcher, J Astarita, V Lukacs-Kornek, P Tayalia, ... Nature immunology 13 (5), 499-510, 2012 | 489 | 2012 |
| Cytomegalovirus infection enhances the immune response to influenza D Furman, V Jojic, S Sharma, SS Shen-Orr, CJ L. Angel, ... Science translational medicine 7 (281), 281ra43-281ra43, 2015 | 415 | 2015 |
| Transcriptional insights into the CD8+ T cell response to infection and memory T cell formation JA Best, DA Blair, J Knell, E Yang, V Mayya, A Doedens, ML Dustin, ... Nature immunology 14 (4), 404-412, 2013 | 393 | 2013 |
| Expression of specific inflammasome gene modules stratifies older individuals into two extreme clinical and immunological states D Furman, J Chang, L Lartigue, CR Bolen, F Haddad, B Gaudilliere, ... Nature medicine 23 (2), 174-184, 2017 | 391 | 2017 |
| Conservation and divergence in the transcriptional programs of the human and mouse immune systems T Shay, V Jojic, O Zuk, K Rothamel, D Puyraimond-Zemmour, T Feng, ... Proceedings of the National Academy of Sciences 110 (8), 2946-2951, 2013 | 369 | 2013 |
| An inflammatory aging clock (iAge) based on deep learning tracks multimorbidity, immunosenescence, frailty and cardiovascular aging N Sayed, Y Huang, K Nguyen, Z Krejciova-Rajaniemi, AP Grawe, T Gao, ... Nature aging 1 (7), 598-615, 2021 | 339 | 2021 |
| Molecular definition of the identity and activation of natural killer cells NA Bezman, CC Kim, JC Sun, G Min-Oo, DW Hendricks, Y Kamimura, ... Nature immunology 13 (10), 1000-1009, 2012 | 307 | 2012 |
| The transcriptional landscape of αβ T cell differentiation M Mingueneau, T Kreslavsky, D Gray, T Heng, R Cruse, J Ericson, ... Nature immunology 14 (6), 619-632, 2013 | 306 | 2013 |
| A panoramic view of yeast noncoding RNA processing WT Peng, MD Robinson, S Mnaimneh, NJ Krogan, G Cagney, Q Morris, ... Cell 113 (7), 919-933, 2003 | 302 | 2003 |
| Intrathymic programming of effector fates in three molecularly distinct γδ T cell subtypes K Narayan, KE Sylvia, N Malhotra, CC Yin, G Martens, T Vallerskog, ... Nature immunology 13 (5), 511-518, 2012 | 228 | 2012 |
| Patchmatch based joint view selection and depthmap estimation E Zheng, E Dunn, V Jojic, JM Frahm Proceedings of the IEEE conference on computer vision and pattern …, 2014 | 219 | 2014 |
| Design of synthetic bacterial communities for predictable plant phenotypes S Herrera Paredes, T Gao, TF Law, OM Finkel, T Mucyn, PJPL Teixeira, ... PLoS biology 16 (2), e2003962, 2018 | 216 | 2018 |
| Identification of transcriptional regulators in the mouse immune system V Jojic, T Shay, K Sylvia, O Zuk, X Sun, J Kang, A Regev, D Koller Nature immunology 14 (6), 633-643, 2013 | 205 | 2013 |
| Apoptosis and other immune biomarkers predict influenza vaccine responsiveness D Furman, V Jojic, B Kidd, S Shen‐Orr, J Price, J Jarrell, T Tse, H Huang, ... Molecular systems biology 9 (1), 659, 2013 | 196 | 2013 |
| The immunoregulatory landscape of human tuberculosis granulomas EF McCaffrey, M Donato, L Keren, Z Chen, A Delmastro, MB Fitzpatrick, ... Nature immunology 23 (2), 318-329, 2022 | 167 | 2022 |
| Genovo: de novo assembly for metagenomes J Laserson, V Jojic, D Koller Journal of Computational Biology 18 (3), 429-443, 2011 | 152 | 2011 |