| Genome organization controls transcriptional dynamics during development PJ Batut, XY Bing, Z Sisco, J Raimundo, M Levo, MS Levine Science 375 (6580), 566-570, 2022 | 157 | 2022 |
| Transcriptional coupling of distant regulatory genes in living embryos M Levo, J Raimundo, XY Bing, Z Sisco, PJ Batut, S Ryabichko, T Gregor, ... Nature 605 (7911), 754-760, 2022 | 111 | 2022 |
| A subcellular tug of war involving three MYB‐like proteins underlies a molecular antagonism in Antirrhinum flower asymmetry J Raimundo, R Sobral, P Bailey, H Azevedo, L Galego, J Almeida, E Coen, ... The Plant Journal 75 (4), 527-538, 2013 | 90 | 2013 |
| A comprehensive assessment of the transcriptome of cork oak (Quercus suber) through EST sequencing JB Pereira-Leal, IA Abreu, CS Alabaça, MH Almeida, P Almeida, ... BMC genomics 15, 1-14, 2014 | 51 | 2014 |
| The nuclear to cytoplasmic ratio directly regulates zygotic transcription in Drosophila through multiple modalities S Syed, H Wilky, J Raimundo, B Lim, AA Amodeo Proceedings of the National Academy of Sciences 118 (14), e2010210118, 2021 | 42 | 2021 |
| Optogenetic control of the Bicoid morphogen reveals fast and slow modes of gap gene regulation AP Singh, P Wu, S Ryabichko, J Raimundo, M Swan, E Wieschaus, ... Cell reports 38 (12), 2022 | 36 | 2022 |
| Successive domain rearrangements underlie the evolution of a regulatory module controlled by a small interfering peptide J Raimundo, R Sobral, S Laranjeira, MMR Costa Molecular biology and evolution 35 (12), 2873-2885, 2018 | 12 | 2018 |
| Modeling transcriptional regulation of model species with deep learning EM Cofer, J Raimundo, A Tadych, Y Yamazaki, AK Wong, CL Theesfeld, ... Genome Research 31 (6), 1097-1105, 2021 | 9 | 2021 |
| SnapShot: the regulatory genome XY Bing, PJ Batut, M Levo, M Levine, J Raimundo Cell 182 (6), 1674-1674. e1, 2020 | 5 | 2020 |
| How do genomes encode developmental time? J Raimundo, M Levine Genes & Development 37 (1-2), 37-40, 2023 | 2 | 2023 |
| DeepArk: modeling cis-regulatory codes of model species with deep learning EM Cofer, J Raimundo, A Tadych, Y Yamazaki, AK Wong, CL Theesfeld, ... bioRxiv, 2020.04. 23.058040, 2020 | 1 | 2020 |
| Evolution of the gene regulatory network controlling flower dorsoventral asymmetry JAP Raimundo | 1 | 2015 |
| Input-response function for spatiotemporally modulated input transcription factor and target gene outputs A Singh, P Wu, S Ryabichko, J Raimundo, M Swan, E Wieschaus, ... APS March Meeting Abstracts 2022, Z07. 003, 2022 | | 2022 |
| Unravelling the role of DRIF transcription factors in Arabidopsis thaliana AM Cunha, S Laranjeira, S Singh, J Raimundo, R Sobral, MMR Costa Free Radical Biology and Medicine 120, S116, 2018 | | 2018 |
| Flower asymmetry is established by a molecular antagonism involving three MYB-like proteins J Raimundo, R Sobral, E Coen, MMR Costa FEBS JOURNAL 279, 75-75, 2012 | | 2012 |
| Molecular Analysis of Flower Bilateral Symmetry JAP Raimundo, R Sobral, ES Coen, MMR Costa SEFV 2011: programa de sesiones y resúmenes de conferencias plenarias e …, 2011 | | 2011 |
| Functional characterisation of a new class of MYB-like genes in Arabidopsis thaliana and Antirrhinum majus JAP Raimundo | | 2010 |