| Sequence-specific error profile of Illumina sequencers K Nakamura, T Oshima, T Morimoto, S Ikeda, H Yoshikawa, Y Shiwa, ... Nucleic acids research 39 (13), e90-e90, 2011 | 766 | 2011 |
| A global metagenomic map of urban microbiomes and antimicrobial resistance D Danko, D Bezdan, EE Afshin, S Ahsanuddin, C Bhattacharya, DJ Butler, ... Cell 184 (13), 3376-3393. e17, 2021 | 255 | 2021 |
| Plant Raf-like kinase integrates abscisic acid and hyperosmotic stress signaling upstream of SNF1-related protein kinase2 M Saruhashi, T Kumar Ghosh, K Arai, Y Ishizaki, K Hagiwara, K Komatsu, ... Proceedings of the National Academy of Sciences 112 (46), E6388-E6396, 2015 | 157 | 2015 |
| Discovery of Genome-Wide DNA Polymorphisms in a Landrace Cultivar of Japonica Rice by Whole-Genome Sequencing Y Arai-Kichise, Y Shiwa, H Nagasaki, K Ebana, H Yoshikawa, M Yano, ... Plant and cell physiology 52 (2), 274-282, 2011 | 151 | 2011 |
| Identification of Substrain-Specific Mutations by Massively Parallel Whole-Genome Resequencing of Synechocystis sp. PCC 6803 Y Kanesaki, Y Shiwa, N Tajima, M Suzuki, S Watanabe, N Sato, M Ikeuchi, ... DNA research 19 (1), 67-79, 2012 | 146 | 2012 |
| Study profile of the Tohoku medical megabank community-based cohort study A Hozawa, K Tanno, N Nakaya, T Nakamura, N Tsuchiya, T Hirata, ... Journal of epidemiology 31 (1), 65-76, 2021 | 120 | 2021 |
| Whole-genome resequencing shows numerous genes with nonsynonymous SNPs in the Japanese native cattle Kuchinoshima-Ushi R Kawahara-Miki, K Tsuda, Y Shiwa, Y Arai-Kichise, T Matsumoto, ... BMC genomics 12, 1-8, 2011 | 104 | 2011 |
| Genetic predisposition to ischemic stroke T Hachiya, Y Kamatani, A Takahashi, J Hata, R Furukawa, Y Shiwa, ... Stroke, 2017 | 89 | 2017 |
| Light‐dependent and asynchronous replication of cyanobacterial multi‐copy chromosomes S Watanabe, R Ohbayashi, Y Shiwa, A Noda, Y Kanesaki, T Chibazakura, ... Molecular microbiology 83 (4), 856-865, 2012 | 77 | 2012 |
| Strigolactone Regulates Anthocyanin Accumulation, Acid Phosphatases Production and Plant Growth under Low Phosphate Condition in Arabidopsis S Ito, T Nozoye, E Sasaki, M Imai, Y Shiwa, M Shibata-Hatta, T Ishige, ... PloS one 10 (3), e0119724, 2015 | 75 | 2015 |
| Bacterial Diversity Associated With the Rhizosphere and Endosphere of Two Halophytes: Glaux maritima and Salicornia europaea K Yamamoto, Y Shiwa, T Ishige, H Sakamoto, K Tanaka, M Uchino, ... Frontiers in microbiology 9, 2878, 2018 | 74 | 2018 |
| Comprehensive identification of translation start sites by tetracycline-inhibited ribosome profiling K Nakahigashi, Y Takai, M Kimura, N Abe, T Nakayashiki, Y Shiwa, ... DNA Research 23 (3), 193-201, 2016 | 73 | 2016 |
| Comparative genomics of Fructobacillus spp. and Leuconostoc spp. reveals niche-specific evolution of Fructobacillus spp. A Endo, Y Tanizawa, N Tanaka, S Maeno, H Kumar, Y Shiwa, S Okada, ... BMC genomics 16, 1-13, 2015 | 68 | 2015 |
| Defect in the formation of 70S ribosomes caused by lack of ribosomal protein L34 can be suppressed by magnesium G Akanuma, A Kobayashi, S Suzuki, F Kawamura, Y Shiwa, S Watanabe, ... Journal of bacteriology 196 (22), 3820-3830, 2014 | 66 | 2014 |
| Complete Genome Sequence of Lactococcus lactis IO-1, a Lactic Acid Bacterium That Utilizes Xylose and Produces High Levels of l-Lactic Acid H Kato, Y Shiwa, K Oshima, M Machii, T Araya-Kojima, T Zendo, ... Journal of bacteriology 194 (8), 2102-2103, 2012 | 65 | 2012 |
| iMETHYL: an integrative database of human DNA methylation, gene expression, and genomic variation S Komaki, Y Shiwa, R Furukawa, T Hachiya, H Ohmomo, R Otomo, ... Human genome variation 5 (1), 1-4, 2018 | 64 | 2018 |
| Multiple rRNA operons are essential for efficient cell growth and sporulation as well as outgrowth in Bacillus subtilis K Yano, T Wada, S Suzuki, K Tagami, T Matsumoto, Y Shiwa, T Ishige, ... Microbiology 159 (Pt_11), 2225-2236, 2013 | 64 | 2013 |
| Genome-wide identification of inter-individually variable DNA methylation sites improves the efficacy of epigenetic association studies T Hachiya, R Furukawa, Y Shiwa, H Ohmomo, K Ono, F Katsuoka, ... NPJ genomic medicine 2 (1), 11, 2017 | 63 | 2017 |
| Effect of codon adaptation on codon-level and gene-level translation efficiency in vivo K Nakahigashi, Y Takai, Y Shiwa, M Wada, M Honma, H Yoshikawa, ... BMC genomics 15, 1-15, 2014 | 63 | 2014 |
| Δ12-fatty acid desaturase is involved in growth at low temperature in yeast Yarrowia lipolytica S Tezaki, R Iwama, S Kobayashi, Y Shiwa, H Yoshikawa, A Ohta, ... Biochemical and Biophysical Research Communications 488 (1), 165-170, 2017 | 43 | 2017 |
