| The transcriptional landscape of the mammalian genome P Carninci, T Kasukawa, S Katayama, J Gough, MC Frith, N Maeda, ... Science 309 (5740), 1559-1563, 2005 | 4128 | 2005 |
| An atlas of active enhancers across human cell types and tissues Nature 507 (7493), 455-61, 2014 | 2746 | 2014 |
| Bellerophon: a program to detect chimeric sequences in multiple sequence alignments T Huber, G Faulkner, P Hugenholtz Bioinformatics 20 (14), 2317-2319, 2004 | 1816 | 2004 |
| A promoter-level mammalian expression atlas TF Consortium Nature 507 (7493), 462-470, 2014 | 1772 | 2014 |
| Analyses of pig genomes provide insight into porcine demography and evolution MAM Groenen, AL Archibald, H Uenishi, CK Tuggle, Y Takeuchi, ... Nature 491 (7424), 393-398, 2012 | 1533 | 2012 |
| Stem cell transcriptome profiling via massive-scale mRNA sequencing N Cloonan, ARR Forrest, G Kolle, BBA Gardiner, GJ Faulkner, MK Brown, ... Nature methods 5 (7), 613-619, 2008 | 1394 | 2008 |
| The regulated retrotransposon transcriptome of mammalian cells GJ Faulkner, Y Kimura, CO Daub, S Wani, C Plessy, KM Irvine, ... Nature genetics 41 (5), 563-571, 2009 | 911 | 2009 |
| Somatic retrotransposition alters the genetic landscape of the human brain JK Baillie, MW Barnett, KR Upton, DJ Gerhardt, TA Richmond, F De Sapio, ... Nature 479 (7374), 534-537, 2011 | 832 | 2011 |
| Transcribed enhancers lead waves of coordinated transcription in transitioning mammalian cells E Arner, CO Daub, K Vitting-Seerup, R Andersson, B Lilje, F Drabløs, ... Science 347 (6225), 1010-1014, 2015 | 626 | 2015 |
| Tiny RNAs associated with transcription start sites in animals RJ Taft, EA Glazov, N Cloonan, C Simons, S Stephen, GJ Faulkner, ... Nature genetics 41 (5), 572-578, 2009 | 439 | 2009 |
| Endogenous Retrotransposition Activates Oncogenic Pathways in Hepatocellular Carcinoma R Shukla, KR Upton, M Muñoz-Lopez, DJ Gerhardt, ME Fisher, T Nguyen, ... Cell 153 (1), 101-111, 2013 | 437 | 2013 |
| The transcriptional network that controls growth arrest and differentiation in a human myeloid leukemia cell line H Suzuki, ARR Forrest, E van Nimwegen, CO Daub, PJ Balwierz, ... Nature genetics 41 (5), 553-562, 2009 | 414 | 2009 |
| Ubiquitous L1 Mosaicism in Hippocampal Neurons KR Upton, DJ Gerhardt, JS Jesuadian, SR Richardson, ... Cell 161 (2), 228-239, 2015 | 370 | 2015 |
| Conservation and divergence in Toll-like receptor 4-regulated gene expression in primary human versus mouse macrophages K Schroder, KM Irvine, MS Taylor, NJ Bokil, KA Le Cao, KA Masterman, ... Proceedings of the National Academy of Sciences 109 (16), E944-E953, 2012 | 349 | 2012 |
| Extensive somatic L1 retrotransposition in colorectal tumors S Solyom, AD Ewing, EP Rahrmann, T Doucet, HH Nelson, MB Burns, ... Genome research 22 (12), 2328-2338, 2012 | 310 | 2012 |
| A global view of genomic information–moving beyond the gene and the master regulator JS Mattick, RJ Taft, GJ Faulkner Trends in genetics 26 (1), 21-28, 2010 | 296 | 2010 |
| FANTOM5 CAGE profiles of human and mouse samples S Noguchi, T Arakawa, S Fukuda, M Furuno, A Hasegawa, F Hori, ... Scientific data 4 (1), 1-10, 2017 | 252 | 2017 |
| Overcoming challenges and dogmas to understand the functions of pseudogenes SW Cheetham, GJ Faulkner, ME Dinger Nature Reviews Genetics 21 (3), 191-201, 2020 | 240 | 2020 |
| Point Mutations in Exon 1B of APC Reveal Gastric Adenocarcinoma and Proximal Polyposis of the Stomach as a Familial Adenomatous Polyposis Variant J Li, SL Woods, S Healey, J Beesley, X Chen, JS Lee, H Sivakumaran, ... The American Journal of Human Genetics 98 (5), 830-842, 2016 | 240 | 2016 |
| The Role of Transposable Elements in Health and Diseases of the Central Nervous System MT Reilly, GJ Faulkner, J Dubnau, I Ponomarev, FH Gage The Journal of Neuroscience 33 (45), 17577-17586, 2013 | 197 | 2013 |
