A discrete geometric approach for simulating the dynamics of thin viscous threads B Audoly, N Clauvelin, PT Brun, M Bergou, E Grinspun, M Wardetzky Journal of Computational Physics 253, 18-49, 2013 | 82 | 2013 |
Elastic knots B Audoly, N Clauvelin, S Neukirch Physical Review Letters 99 (16), 164301, 2007 | 75 | 2007 |
Mechanical response of plectonemic DNA: An analytical solution N Clauvelin, B Audoly, S Neukirch Macromolecules 41 (12), 4479-4483, 2008 | 59 | 2008 |
Elasticity and electrostatics of plectonemic DNA N Clauvelin, B Audoly, S Neukirch Biophysical journal 96 (9), 3716-3723, 2009 | 54 | 2009 |
Internucleosomal interactions mediated by histone tails allow distant communication in chromatin OI Kulaeva, G Zheng, YS Polikanov, AV Colasanti, N Clauvelin, ... Journal of Biological Chemistry 287 (24), 20248-20257, 2012 | 52 | 2012 |
Characterization of the geometry and topology of DNA pictured as a discrete collection of atoms N Clauvelin, WK Olson, I Tobias Journal of chemical theory and computation 8 (3), 1092-1107, 2012 | 42 | 2012 |
Matched asymptotic expansions for twisted elastic knots: a self-contact problem with non-trivial contact topology N Clauvelin, B Audoly, S Neukirch Journal of the Mechanics and Physics of Solids 57 (9), 1623-1656, 2009 | 39 | 2009 |
Nucleosome-free DNA regions differentially affect distant communication in chromatin EV Nizovtseva, N Clauvelin, S Todolli, YS Polikanov, OI Kulaeva, ... Nucleic acids research 45 (6), 3059-3067, 2017 | 36 | 2017 |
Nucleosome positioning and composition modulate in silico chromatin flexibility N Clauvelin, P Lo, OI Kulaeva, EV Nizovtseva, J Diaz-Montes, J Zola, ... Journal of Physics: Condensed Matter 27 (6), 064112, 2015 | 34 | 2015 |
Contributions of sequence to the higher-order structures of DNA S Todolli, PJ Perez, N Clauvelin, WK Olson Biophysical journal 112 (3), 416-426, 2017 | 26 | 2017 |
Insights into gene expression and packaging from computer simulations WK Olson, N Clauvelin, AV Colasanti, G Singh, G Zheng Biophysical reviews 4, 171-178, 2012 | 13 | 2012 |
What controls DNA looping? PJ Perez, N Clauvelin, MA Grosner, AV Colasanti, WK Olson International journal of molecular sciences 15 (9), 15090-15108, 2014 | 12 | 2014 |
Weak operator binding enhances simulated lac repressor‐mediated DNA looping AV Colasanti, MA Grosner, PJ Perez, N Clauvelin, XJ Lu, WK Olson Biopolymers 99 (12), 1070-1081, 2013 | 12 | 2013 |
Synergy between protein positioning and DNA elasticity: energy minimization of protein-decorated DNA minicircles N Clauvelin, WK Olson The Journal of Physical Chemistry B 125 (9), 2277-2287, 2021 | 11* | 2021 |
Parallels between DNA and collagen–comparing elastic models of the double and triple helix F Xu, H Zheng, N Clauvelin, XJ Lu, WK Olson, V Nanda Scientific reports 7 (1), 12802, 2017 | 8 | 2017 |
Analytical results for the plectonemic response of supercoiled DNA N Clauvelin, B Audoly, S Neukirch Journal of computer-aided materials design 14, 95-101, 2007 | 4 | 2007 |
emDNA–A Tool for Modeling Protein-decorated DNA Loops and Minicircles at the Base-pair Step Level RT Young, N Clauvelin, WK Olson Journal of molecular biology 434 (11), 167558, 2022 | 3 | 2022 |
Opposite effects of histone H1 and HMGN5 protein on distant interactions in chromatin EV Nizovtseva, YS Polikanov, OI Kulaeva, N Clauvelin, YV Postnikov, ... Molecular Biology 53, 912-921, 2019 | 3 | 2019 |
Effect of the boundary conditions and influence of the rotational inertia on the vibrational modes of an elastic ring N Clauvelin, WK Olson, I Tobias Journal of Elasticity 115, 193-224, 2014 | 3 | 2014 |
DNA Looping and Genome Architecture: How Proteins can Connect and Organize Chromosomes N Clauvelin, WK Olson Biophysical Journal 108 (2), 399a, 2015 | 2 | 2015 |