PrePPI: a structure-informed database of protein–protein interactions QC Zhang, D Petrey, JI Garzón, L Deng, B Honig Nucleic acids research 41 (D1), D828-D833, 2012 | 277 | 2012 |
iMod: multipurpose normal mode analysis in internal coordinates JR Lopéz-Blanco, JI Garzón, P Chacón Bioinformatics 27 (20), 2843-2850, 2011 | 254 | 2011 |
FRODOCK: a new approach for fast rotational protein–protein docking JI Garzon, JR Lopéz-Blanco, C Pons, J Kovacs, R Abagyan, ... Bioinformatics 25 (19), 2544-2551, 2009 | 178 | 2009 |
ADP_EM: fast exhaustive multi-resolution docking for high-throughput coverage JI Garzon, J Kovacs, R Abagyan, P Chacon Bioinformatics 23 (4), 427-433, 2007 | 120 | 2007 |
A computational interactome and functional annotation for the human proteome JI Garzon, L Deng, D Murray, S Shapira, D Petrey, B Honig Elife 5, e18715, 2016 | 64 | 2016 |
Template-based prediction of protein function D Petrey, TS Chen, L Deng, JI Garzon, H Hwang, G Lasso, H Lee, ... Current opinion in structural biology 32, 33-38, 2015 | 50 | 2015 |
DrugScorePPI Knowledge-Based Potentials Used as Scoring and Objective Function in Protein-Protein Docking DM Krüger, J Ignacio Garzón, P Chacón, H Gohlke PloS one 9 (2), e89466, 2014 | 28 | 2014 |
Predicting peptide-mediated interactions on a genome-wide scale TS Chen, D Petrey, JI Garzon, B Honig PLoS computational biology 11 (5), e1004248, 2015 | 23 | 2015 |
DFprot: a webtool for predicting local chain deformability JI Garzon, J Kovacs, R Abagyan, P Chacon Bioinformatics 23 (7), 901-902, 2007 | 23 | 2007 |
DynaFace: discrimination between obligatory and non-obligatory protein-protein interactions based on the complex’s dynamics S Soner, P Ozbek, JI Garzon, N Ben-Tal, T Haliloglu PLoS Computational Biology 11 (10), e1004461, 2015 | 10 | 2015 |
Adaptation of a Multi-Resolution Docking Bioinformatics Application to the Grid. JI Garzón, E Huedo, RS Montero, IM Llorente, P Chacón J. Softw. 2 (2), 1-10, 2007 | 6 | 2007 |
FRODRUG: A virtual screening GPU accelerated approach for drug discovery SG Sánchez, ER Aportela, JI Garzón, P Chacón, AS Montemayor, ... 2014 22nd Euromicro international conference on parallel, distributed, and …, 2014 | 4 | 2014 |
Predicting protein-protein interactions with DrugScorePPI: fully-flexible docking, scoring, and in silicoalanine-scanning DM Krüger, JI Garzón, PC Montes, H Gohlke Journal of cheminformatics 3, 1-1, 2011 | 3 | 2011 |
DynaFace: Discrimination between Obligatory and Non-obligatory Protein-Protein Interactions Based on the Complex’s Dynamics T Haliloglu, N Ben-Tal, J Garzon, P Ozbek, S Soner | 2 | 2015 |
End-To-End Cache System for Grid Computing: Design and Efficiency Analysis of a High-Throughput Bioinformatic Docking Application J Ignacio Garzon, E Huedo, R Santiago Montero, I Martin Llorente, ... The International Journal of High Performance Computing Applications 24 (3 …, 2010 | 2 | 2010 |
Uncovering the disorder of breast invasive carcinoma homeostasis proteins JV Castro, EO Paull, JI Garzon, D Murray, A Califano, B Honig Cancer Research 78 (13_Supplement), 285-285, 2018 | | 2018 |
Structure-based prediction of protein-protein and protein-ligand interactions on a genomic scale J Garzon, H Hwang, F Dey, D Murray, D Petrey, B Honig ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY 254, 2017 | | 2017 |
Predicting Protein-protein Interactions with DrugScorePPI: Docking, Scoring, and in silico Alanine-scanning DM Kruger, JI Garzón, P Chacon, H Gohlke From Computational Biophysics to Systems Biology (CBSB11)–Celebrating Harold …, 2012 | | 2012 |
Predicting protein-protein interactions with DrugScorePPI: fully-flexible docking, scoring, and in silico alanine-scanning JI Garzón, DM Krüger, P Chacón, H Gohlken BioMed Central, 2011 | | 2011 |
Grid Multi-Resolution Docking JI Garzón, E Huedo, RS Montero, IM Llorente, P Chacon 15th EUROMICRO International Conference on Parallel, Distributed and Network …, 2007 | | 2007 |