| GeneCodis3: a non-redundant and modular enrichment analysis tool for functional genomics D Tabas-Madrid, R Nogales-Cadenas, A Pascual-Montano Nucleic acids research 40 (W1), W478-W483, 2012 | 626 | 2012 |
| GeneCodis: interpreting gene lists through enrichment analysis and integration of diverse biological information R Nogales-Cadenas, P Carmona-Saez, M Vazquez, C Vicente, X Yang, ... Nucleic acids research 37 (suppl_2), W317-W322, 2009 | 501 | 2009 |
| Babelomics: an integrative platform for the analysis of transcriptomics, proteomics and genomic data with advanced functional profiling I Medina, J Carbonell, L Pulido, SC Madeira, S Goetz, A Conesa, ... Nucleic acids research 38 (suppl_2), W210-W213, 2010 | 367 | 2010 |
| Quantification of miRNA-mRNA interactions A Muniategui, R Nogales-Cadenas, M Vázquez, X L. Aranguren, X Agirre, ... PloS one 7 (2), e30766, 2012 | 103 | 2012 |
| CentrosomeDB: a human centrosomal proteins database R Nogales-Cadenas, F Abascal, J Díez-Pérez, JM Carazo, ... Nucleic acids research 37 (suppl_1), D175-D180, 2009 | 82 | 2009 |
| miR-217 is an oncogene that enhances the germinal center reaction VG de Yébenes, N Bartolomé-Izquierdo, R Nogales-Cadenas, ... Blood, The Journal of the American Society of Hematology 124 (2), 229-239, 2014 | 71 | 2014 |
| CentrosomeDB: a new generation of the centrosomal proteins database for Human and Drosophila melanogaster JMC Alves-Cruzeiro, R Nogales-Cadenas, AD Pascual-Montano Nucleic acids research 42 (D1), D430-D436, 2014 | 71 | 2014 |
| MicroRNAs control the maintenance of thymic epithelia and their competence for T lineage commitment and thymocyte selection S Zuklys, CE Mayer, S Zhanybekova, HE Stefanski, G Nusspaumer, J Gill, ... The Journal of Immunology 189 (8), 3894-3904, 2012 | 68 | 2012 |
| Functional analysis beyond enrichment: non-redundant reciprocal linkage of genes and biological terms C Fontanillo, R Nogales-Cadenas, A Pascual-Montano, J De Las Rivas PloS one 6 (9), e24289, 2011 | 58 | 2011 |
| Finding closed frequent item sets by intersecting transactions C Borgelt, X Yang, R Nogales-Cadenas, P Carmona-Saez, ... Proceedings of the 14th International Conference on Extending Database …, 2011 | 56 | 2011 |
| bioNMF: a web-based tool for nonnegative matrix factorization in biology E Mejía-Roa, P Carmona-Saez, R Nogales, C Vicente, M Vázquez, ... Nucleic acids research 36 (suppl_2), W523-W528, 2008 | 49 | 2008 |
| Integrated post-GWAS analysis sheds new light on the disease mechanisms of schizophrenia JR Lin, Y Cai, Q Zhang, W Zhang, R Nogales-Cadenas, ZD Zhang Genetics 204 (4), 1587-1600, 2016 | 48 | 2016 |
| Systems-level analysis of human aging genes shed new light on mechanisms of aging Q Zhang, R Nogales-Cadenas, JR Lin, W Zhang, Y Cai, J Vijg, ZD Zhang Human molecular genetics 25 (14), 2934-2947, 2016 | 41 | 2016 |
| Transcriptomic dynamics of breast cancer progression in the MMTV-PyMT mouse model Y Cai, R Nogales-Cadenas, Q Zhang, JR Lin, W Zhang, K O’Brien, ... Bmc Genomics 18, 1-14, 2017 | 39 | 2017 |
| MARQ: an online tool to mine GEO for experiments with similar or opposite gene expression signatures M Vazquez, R Nogales-Cadenas, J Arroyo, P Botï¿ ½as, R Garcï¿ ½a, ... Nucleic acids research 38 (suppl_2), W228-W232, 2010 | 33 | 2010 |
| Distinct molecular signature of murine fetal liver and adult hematopoietic stem cells identify novel regulators of hematopoietic stem cell function JK Manesia, M Franch, D Tabas-Madrid, R Nogales-Cadenas, ... Stem cells and development 26 (8), 573-584, 2017 | 28 | 2017 |
| Proteopathogen, a protein database for studying Candida albicans – host interaction V Vialas, R Nogales‐Cadenas, C Nombela, A Pascual‐Montano, C Gil Proteomics 9 (20), 4664-4668, 2009 | 24 | 2009 |
| 3DEM Loupe: analysis of macromolecular dynamics using structures from electron microscopy R Nogales-Cadenas, S Jonic, F Tama, AA Arteni, D Tabas-Madrid, ... Nucleic acids research 41 (W1), W363-W367, 2013 | 23 | 2013 |
| MicroRNA expression and gene regulation drive breast cancer progression and metastasis in PyMT mice R Nogales-Cadenas, Y Cai, JR Lin, Q Zhang, W Zhang, C Montagna, ... Breast Cancer Research 18, 1-13, 2016 | 20 | 2016 |
| Biclustering and classification analysis in gene expression using nonnegative matrix factorization on multi-GPU systems E Mejía-Roa, C García, JI Gómez, M Prieto, F Tirado, R Nogales, ... 2011 11th International Conference on Intelligent Systems Design and …, 2011 | 17 | 2011 |
