| Molecular portraits of human breast tumours CM Perou, T Sørlie, MB Eisen, M Van De Rijn, SS Jeffrey, CA Rees, ... nature 406 (6797), 747-752, 2000 | 21688 | 2000 |
| Cluster analysis and display of genome-wide expression patterns MB Eisen, PT Spellman, PO Brown, D Botstein Proceedings of the National Academy of Sciences 95 (25), 14863-14868, 1998 | 20677 | 1998 |
| Gene expression patterns of breast carcinomas distinguish tumor subclasses with clinical implications T Sørlie, CM Perou, R Tibshirani, T Aas, S Geisler, H Johnsen, T Hastie, ... Proceedings of the National Academy of Sciences 98 (19), 10869-10874, 2001 | 14419 | 2001 |
| Distinct types of diffuse large B-cell lymphoma identified by gene expression profiling AA Alizadeh, MB Eisen, RE Davis, C Ma, IS Lossos, A Rosenwald, ... Nature 403 (6769), 503-511, 2000 | 12699 | 2000 |
| Comprehensive Identification of Cell Cycle–regulated Genes of the Yeast Saccharomyces cerevisiae by Microarray Hybridization PT Spellman, G Sherlock, MQ Zhang, VR Iyer, K Anders, MB Eisen, ... Molecular biology of the cell 9 (12), 3273-3297, 1998 | 6540 | 1998 |
| Genomic expression programs in the response of yeast cells to environmental changes AP Gasch, PT Spellman, CM Kao, O Carmel-Harel, MB Eisen, G Storz, ... Molecular biology of the cell 11 (12), 4241-4257, 2000 | 5926 | 2000 |
| Systematic variation in gene expression patterns in human cancer cell lines DT Ross, U Scherf, MB Eisen, CM Perou, C Rees, P Spellman, V Iyer, ... Nature genetics 24 (3), 227-235, 2000 | 2755 | 2000 |
| The transcriptional program in the response of human fibroblasts to serum VR Iyer, MB Eisen, DT Ross, G Schuler, T Moore, JCF Lee, JM Trent, ... science 283 (5398), 83-87, 1999 | 2645 | 1999 |
| The transcriptional program of sporulation in budding yeast S Chu, J DeRisi, M Eisen, J Mulholland, D Botstein, PO Brown, ... Science 282 (5389), 699-705, 1998 | 2452 | 1998 |
| Evolution of genes and genomes on the Drosophila phylogeny AG Clark, MB Eisen, DR Smith, CM Bergman, B Oliver, TA Markow, ... Nature 450 (7167), 203-18, 2007 | 2266 | 2007 |
| Insights into social insects from the genome of the honeybee Apis mellifera Honeybee Genome Sequencing Consortium Nature 443 (7114), 931, 2006 | 2053* | 2006 |
| Genome-wide analysis of DNA copy-number changes using cDNA microarrays JR Pollack, CM Perou, AA Alizadeh, MB Eisen, A Pergamenschikov, ... Nature genetics 23 (1), 41-46, 1999 | 2044 | 1999 |
| A gene expression database for the molecular pharmacology of cancer U Scherf, DT Ross, M Waltham, LH Smith, JK Lee, L Tanabe, KW Kohn, ... Nature genetics 24 (3), 236-244, 2000 | 1862 | 2000 |
| [12] DNA arrays for analysis of gene expression MB Eisen, PO Brown Methods in enzymology 303, 179-205, 1999 | 1500 | 1999 |
| In vivo enhancer analysis of human conserved non-coding sequences LA Pennacchio, N Ahituv, AM Moses, S Prabhakar, MA Nobrega, ... Nature 444 (7118), 499-502, 2006 | 1364 | 2006 |
| Tools for neuroanatomy and neurogenetics in Drosophila BD Pfeiffer, A Jenett, AS Hammonds, TTB Ngo, S Misra, C Murphy, ... Proceedings of the National Academy of Sciences 105 (28), 9715-9720, 2008 | 1013 | 2008 |
| Exploiting transcription factor binding site clustering to identify cis-regulatory modules involved in pattern formation in the Drosophila genome BP Berman, Y Nibu, BD Pfeiffer, P Tomancak, SE Celniker, M Levine, ... Proceedings of the National Academy of Sciences 99 (2), 757-762, 2002 | 769 | 2002 |
| 'Gene shaving'as a method for identifying distinct sets of genes with similar expression patterns T Hastie, R Tibshirani, MB Eisen, A Alizadeh, R Levy, L Staudt, WC Chan, ... Genome biology 1, 1-21, 2000 | 749 | 2000 |
| Discovery of functional elements in 12 Drosophila genomes using evolutionary signatures A Stark, MF Lin, P Kheradpour, JS Pedersen, L Parts, JW Carlson, ... Nature 450 (7167), 219-232, 2007 | 720 | 2007 |
| Exploring the conditional coregulation of yeast gene expression through fuzzy k-means clustering AP Gasch, MB Eisen Genome biology 3, 1-22, 2002 | 607 | 2002 |
