| Normalization approaches for removing systematic biases associated with mass spectrometry and label-free proteomics SJ Callister, RC Barry, JN Adkins, ET Johnson, W Qian, ... Journal of proteome research 5 (2), 277-286, 2006 | 508 | 2006 |
| Review, evaluation, and discussion of the challenges of missing value imputation for mass spectrometry-based label-free global proteomics BJM Webb-Robertson, HK Wiberg, MM Matzke, JN Brown, J Wang, ... Journal of proteome research 14 (5), 1993-2001, 2015 | 314 | 2015 |
| Pathogenic influenza viruses and coronaviruses utilize similar and contrasting approaches to control interferon-stimulated gene responses VD Menachery, AJ Eisfeld, A Schäfer, L Josset, AC Sims, S Proll, S Fan, ... MBio 5 (3), 10.1128/mbio. 01174-14, 2014 | 274 | 2014 |
| Mechanisms of severe acute respiratory syndrome coronavirus-induced acute lung injury LE Gralinski, A Bankhead III, S Jeng, VD Menachery, S Proll, SE Belisle, ... MBio 4 (4), 10.1128/mbio. 00271-13, 2013 | 274 | 2013 |
| Challenges in biomarker discovery: combining expert insights with statistical analysis of complex omics data JE McDermott, J Wang, H Mitchell, BJ Webb-Robertson, R Hafen, ... Expert opinion on medical diagnostics 7 (1), 37-51, 2013 | 271 | 2013 |
| MERS-CoV and H5N1 influenza virus antagonize antigen presentation by altering the epigenetic landscape VD Menachery, A Schäfer, KE Burnum-Johnson, HD Mitchell, AJ Eisfeld, ... Proceedings of the National Academy of Sciences 115 (5), E1012-E1021, 2018 | 223 | 2018 |
| The cancer microbiome: distinguishing direct and indirect effects requires a systemic view JB Xavier, VB Young, J Skufca, F Ginty, T Testerman, AT Pearson, ... Trends in cancer 6 (3), 192-204, 2020 | 211 | 2020 |
| MPLEx: a robust and universal protocol for single-sample integrative proteomic, metabolomic, and lipidomic analyses ES Nakayasu, CD Nicora, AC Sims, KE Burnum-Johnson, YM Kim, ... MSystems 1 (3), 10.1128/msystems. 00043-16, 2016 | 209* | 2016 |
| Tutorial: best practices and considerations for mass-spectrometry-based protein biomarker discovery and validation ES Nakayasu, M Gritsenko, PD Piehowski, Y Gao, DJ Orton, ... Nature Protocols 16 (8), 3737-3760, 2021 | 204 | 2021 |
| MARRVEL: integration of human and model organism genetic resources to facilitate functional annotation of the human genome J Wang, R Al-Ouran, Y Hu, SY Kim, YW Wan, MF Wangler, S Yamamoto, ... The American Journal of Human Genetics 100 (6), 843-853, 2017 | 193 | 2017 |
| Automated mass spectrometry imaging of over 2000 proteins from tissue sections at 100-μm spatial resolution PD Piehowski, Y Zhu, LM Bramer, KG Stratton, R Zhao, DJ Orton, ... Nature communications 11 (1), 1-12, 2020 | 188 | 2020 |
| The undiagnosed diseases network: accelerating discovery about health and disease RB Ramoni, JJ Mulvihill, DR Adams, P Allard, EA Ashley, JA Bernstein, ... The American Journal of Human Genetics 100 (2), 185-192, 2017 | 175 | 2017 |
| Quantitative proteomics analysis of adsorbed plasma proteins classifies nanoparticles with different surface properties and size H Zhang, KE Burnum, ML Luna, BO Petritis, JS Kim, WJ Qian, RJ Moore, ... Proteomics 11 (23), 4569-4577, 2011 | 174 | 2011 |
| Release of severe acute respiratory syndrome coronavirus nuclear import block enhances host transcription in human lung cells AC Sims, SC Tilton, VD Menachery, LE Gralinski, A Schäfer, MM Matzke, ... Journal of virology 87 (7), 3885-3902, 2013 | 151 | 2013 |
| The impact of proinflammatory cytokines on the β-cell regulatory landscape provides insights into the genetics of type 1 diabetes M Ramos-Rodríguez, H Raurell-Vila, ML Colli, MI Alvelos, ... Nature genetics 51 (11), 1588-1595, 2019 | 140 | 2019 |
| Comparative proteomics and pulmonary toxicity of instilled single-walled carbon nanotubes, crocidolite asbestos, and ultrafine carbon black in mice JG Teeguarden, BJ Webb-Robertson, KM Waters, AR Murray, ER Kisin, ... Toxicological Sciences 120 (1), 123-135, 2011 | 131 | 2011 |
| A syndromic neurodevelopmental disorder caused by de novo variants in EBF3 HT Chao, M Davids, E Burke, JG Pappas, JA Rosenfeld, AJ McCarty, ... The American Journal of Human Genetics 100 (1), 128-137, 2017 | 122 | 2017 |
| Multi-platform’omics analysis of human Ebola virus disease pathogenesis AJ Eisfeld, PJ Halfmann, JP Wendler, JE Kyle, KE Burnum-Johnson, ... Cell host & microbe 22 (6), 817-829. e8, 2017 | 116 | 2017 |
| A support vector machine model for the prediction of proteotypic peptides for accurate mass and time proteomics BJM Webb-Robertson, WR Cannon, CS Oehmen, AR Shah, ... Bioinformatics 26 (13), 1677-1683, 2010 | 116 | 2010 |
| Hepatic cytochrome P450 activity, abundance, and expression throughout human development NC Sadler, P Nandhikonda, BJ Webb-Robertson, C Ansong, ... Drug Metabolism and Disposition 44 (7), 984-991, 2016 | 115 | 2016 |
