| MiDAS: the field guide to the microbes of activated sludge SJ McIlroy, AM Saunders, M Albertsen, M Nierychlo, B McIlroy, ... Database 2015, bav062, 2015 | 316 | 2015 |
| Identification of active denitrifiers in full‐scale nutrient removal wastewater treatment systems SJ McIlroy, A Starnawska, P Starnawski, AM Saunders, M Nierychlo, ... Environmental microbiology 18 (1), 50-64, 2016 | 300 | 2016 |
| MiDAS 4: A global catalogue of full-length 16S rRNA gene sequences and taxonomy for studies of bacterial communities in wastewater treatment plants MKD Dueholm, M Nierychlo, KS Andersen, V Rudkjøbing, S Knutsson, ... Nature communications 13 (1), 1908, 2022 | 285 | 2022 |
| A critical assessment of the microorganisms proposed to be important to enhanced biological phosphorus removal in full-scale wastewater treatment systems M Stokholm-Bjerregaard, SJ McIlroy, M Nierychlo, SM Karst, M Albertsen, ... Frontiers in microbiology 8, 718, 2017 | 278 | 2017 |
| Re-evaluating the microbiology of the enhanced biological phosphorus removal process PH Nielsen, SJ McIlroy, M Albertsen, M Nierychlo Current opinion in biotechnology 57, 111-118, 2019 | 235 | 2019 |
| MiDAS 3: an ecosystem-specific reference database, taxonomy and knowledge platform for activated sludge and anaerobic digesters reveals species-level microbiome composition of … M Nierychlo, KS Andersen, Y Xu, N Green, C Jiang, M Albertsen, ... Water Research 182, 115955, 2020 | 205 | 2020 |
| MiDAS 2.0: an ecosystem-specific taxonomy and online database for the organisms of wastewater treatment systems expanded for anaerobic digester groups SJ McIlroy, RH Kirkegaard, B McIlroy, M Nierychlo, JM Kristensen, ... Database 2017, bax016, 2017 | 183 | 2017 |
| The impact of immigration on microbial community composition in full-scale anaerobic digesters RH Kirkegaard, SJ McIlroy, JM Kristensen, M Nierychlo, SM Karst, ... Scientific reports 7 (1), 9343, 2017 | 176 | 2017 |
| Resolving the individual contribution of key microbial populations to enhanced biological phosphorus removal with Raman–FISH EY Fernando, SJ McIlroy, M Nierychlo, FA Herbst, F Petriglieri, ... The ISME journal 13 (8), 1933-1946, 2019 | 172 | 2019 |
| On the evolution and physiology of cable bacteria KU Kjeldsen, L Schreiber, CA Thorup, T Boesen, JT Bjerg, T Yang, ... Proceedings of the National Academy of Sciences 116 (38), 19116-19125, 2019 | 171 | 2019 |
| Experimental methods and modeling techniques for description of cell population heterogeneity RL Fernandes, M Nierychlo, L Lundin, AE Pedersen, PEP Tellez, A Dutta, ... Biotechnology advances 29 (6), 575-599, 2011 | 153 | 2011 |
| “Candidatus Dechloromonas phosphoritropha” and “Ca. D. phosphorivorans”, novel polyphosphate accumulating organisms abundant in wastewater treatment … F Petriglieri, C Singleton, M Peces, JF Petersen, M Nierychlo, PH Nielsen The ISME Journal 15 (12), 3605-3614, 2021 | 135 | 2021 |
| Long-term effects of sulphide on the enhanced biological removal of phosphorus: the symbiotic role of Thiothrix caldifontis FJ Rubio-Rincón, L Welles, CM Lopez-Vazquez, M Nierychlo, B Abbas, ... Water research 116, 53-64, 2017 | 121 | 2017 |
| Bacteria from the Genus Arcobacter Are Abundant in Effluent from Wastewater Treatment Plants JM Kristensen, M Nierychlo, M Albertsen, PH Nielsen Applied and environmental microbiology 86 (9), e03044-19, 2020 | 92 | 2020 |
| The morphology and metabolic potential of the Chloroflexi in full-scale activated sludge wastewater treatment plants M Nierychlo, A Miłobędzka, F Petriglieri, B McIlroy, PH Nielsen, SJ McIlroy FEMS Microbiology Ecology 95 (2), fiy228, 2019 | 89 | 2019 |
| Genomic and in situ investigations of the novel uncultured Chloroflexi associated with 0092 morphotype filamentous bulking in activated sludge SJ McIlroy, SM Karst, M Nierychlo, MS Dueholm, M Albertsen, ... The ISME Journal 10 (9), 2223-2234, 2016 | 82 | 2016 |
| The novel genus, ‘Candidatus Phosphoribacter’, previously identified as Tetrasphaera, is the dominant polyphosphate accumulating lineage in EBPR wastewater … CM Singleton, F Petriglieri, K Wasmund, M Nierychlo, Z Kondrotaite, ... The ISME journal 16 (6), 1605-1616, 2022 | 76 | 2022 |
| Characterizing the growing microorganisms at species level in 46 anaerobic digesters at Danish wastewater treatment plants: A six-year survey on microbial community structure … C Jiang, M Peces, MH Andersen, S Kucheryavskiy, M Nierychlo, ... Water research 193, 116871, 2021 | 74 | 2021 |
| Mass-immigration determines the assembly of activated sludge microbial communities G Dottorini, TY Michaelsen, S Kucheryavskiy, KS Andersen, ... Proceedings of the National Academy of Sciences 118 (27), e2021589118, 2021 | 71 | 2021 |
| Diversity and Ecophysiology of the Genus OLB8 and Other Abundant Uncultured Saprospiraceae Genera in Global Wastewater Treatment Systems Z Kondrotaite, LC Valk, F Petriglieri, C Singleton, M Nierychlo, ... Frontiers in Microbiology 13, 917553, 2022 | 65 | 2022 |