| Simultaneous quantification of protein–DNA contacts and transcriptomes in single cells K Rooijers, CM Markodimitraki, FJ Rang, SS de Vries, A Chialastri, ... Nature biotechnology 37 (7), 766-772, 2019 | 112 | 2019 |
| An extended culture system that supports human primordial germ cell-like cell survival and initiation of DNA methylation erasure JJ Gell, W Liu, E Sosa, A Chialastri, G Hancock, Y Tao, SE Wamaitha, ... Stem Cell Reports 14 (3), 433-446, 2020 | 42 | 2020 |
| Simultaneous quantification of protein–DNA interactions and transcriptomes in single cells with scDam&T-seq CM Markodimitraki, FJ Rang, K Rooijers, SS de Vries, A Chialastri, ... Nature protocols 15 (6), 1922-1953, 2020 | 29 | 2020 |
| Strand-specific single-cell methylomics reveals distinct modes of DNA demethylation dynamics during early mammalian development M Sen, D Mooijman, A Chialastri, JC Boisset, M Popovic, B Heindryckx, ... Nature Communications 12 (1), 1286, 2021 | 25 | 2021 |
| Control over single-cell distribution of G1 lengths by WNT governs pluripotency J Jang, D Han, M Golkaram, M Audouard, G Liu, D Bridges, S Hellander, ... Plos Biology 17 (9), e3000453, 2019 | 18 | 2019 |
| Optogenetic control of the integrated stress response reveals proportional encoding and the stress memory landscape T Batjargal, F Zappa, RJ Grant, RA Piscopio, A Chialastri, SS Dey, ... Cell Systems 14 (7), 551-562. e5, 2023 | 12 | 2023 |
| A probabilistic framework for cellular lineage reconstruction using integrated single-cell 5-hydroxymethylcytosine and genomic DNA sequencing C Wangsanuwat, A Chialastri, JF Aldeguer, NC Rivron, SS Dey Cell reports methods 1 (4), 2021 | 9 | 2021 |
| Chuva de Sousa Lopes SM, Dey SS, van Oudenaarden A (2021) Strand-specific single-cell methylomics reveals distinct modes of DNA demethylation dynamics during early mammalian … M Sen, D Mooijman, A Chialastri, JC Boisset, M Popovic, B Heindryckx Nat Commun 12 (1286), 10.1038, 0 | 9 | |
| Combinatorial quantification of 5mC and 5hmC at individual CpG dyads and the transcriptome in single cells reveals modulators of DNA methylation maintenance fidelity A Chialastri, S Sarkar, EE Schauer, S Lamba, SS Dey Nature Structural & Molecular Biology 31 (8), 1296-1308, 2024 | 4 | 2024 |
| scDam&T‐seq combines DNA adenine methyltransferase-based labeling of protein-DNA contact sites with transcriptome sequencing to analyze regulatory programs in single cells K Rooijers, CM Markodimitraki, FJ Rang, SS de Vries, A Chialastri, ... Nature biotechnology 37 (7), 766, 2019 | 3 | 2019 |
| Nanotopography-based engineering of retroviral DNA integration patterns Y Jang, Y Park, J Nam, Y Yang, J Lee, K Lee, M Kang, A Chialastri, H Noh, ... Nanoscale 11 (12), 5693-5704, 2019 | 2 | 2019 |
| Integrated single-cell sequencing reveals principles of epigenetic regulation of human gastrulation and germ cell development in a 3D organoid model A Chialastri, E Karzbrun, AH Khankhel, MJ Radeke, SJ Streichan, SS Dey bioRxiv, 2022.02. 10.479957, 2022 | 1 | 2022 |
| Does prostatic urethral lift reduce urinary medications? Trends in medical treatment before and after prostatic urethral lift P Chialastri, A Chialastri, T Mueller Journal of Endourology 35 (5), 657-662, 2021 | 1 | 2021 |
| Clearance of residual genome editing components used for ex vivo genome-editing of allogeneic cell therapy products A Chialastri, H Hoffman, D Fink, JL Dashnau Cytotherapy 26 (11), 1341-1352, 2024 | | 2024 |
| YAP dysregulation triggers hypertrophy by CCN2 secretion and TGFβ uptake in human pluripotent stem cell-derived cardiomyocytes O Chirikian, MA Faynus, M Merk, Z Singh, C Muray, J Pham, A Chialastri, ... bioRxiv, 2024.06. 03.597045, 2024 | | 2024 |
| Screening iPSC lines for optimal characteristics of differentiation into immune effector cells for clinical programs BA Morse, A Cogburn, A Chialastri, MS Hall, O Manor, A Lebid, DH Kim, ... Cancer Research 84 (6_Supplement), 3613-3613, 2024 | | 2024 |
| Integrated single-cell sequencing of 5-hydroxymethylcytosine and genomic DNA using scH&G-seq A Chialastri, C Wangsanuwat, SS Dey STAR protocols 2 (4), 101016, 2021 | | 2021 |
| Developing Single Cell Multiomics Technologies to Understand Mammalian Development AJ Chialastri University of California, Santa Barbara, 2021 | | 2021 |
| An Extended Culture System that Supports Human Primordial Germ Cell-like Cell Survival JJ Gell, W Liu, E Sosa Stem cell reports, 14 (3), 2020 | | 2020 |
| Design of Artificial Enzyme Complexes Based on Microbial Biomimetics JE HYEON 한국생물공학회 학술대회, 111-111, 2019 | | 2019 |
